Gb_07340

Description : Regulator of telomere elongation helicase 1 homolog OS=Arabidopsis thaliana (sp|f4hqe2|rtel1_arath : 137.0)

Gene families : OG0007194 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0007194_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Gb_07340
Cluster	HCCA: Cluster_11

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00109p00029010	evm_27.TU.AmTr_v1...	Regulator of telomere elongation helicase 1 homolog...	0.04	OrthoFinder output from all 47 species
Aop_g13802	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Cre07.g322300	No alias	Regulator of telomere elongation helicase 1 homolog...	0.01	OrthoFinder output from all 47 species
Dcu_g03073	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
LOC_Os05g13300.1	LOC_Os05g13300	Regulator of telomere elongation helicase 1 homolog...	0.08	OrthoFinder output from all 47 species
Mp2g24230.1	No alias	Regulator of telomere elongation helicase 1 homolog...	0.04	OrthoFinder output from all 47 species
Mp2g24240.1	No alias	no hits & (original description: none)	0.03	OrthoFinder output from all 47 species
Msp_g21616	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Solyc06g066670.4.1	Solyc06g066670	Regulator of telomere elongation helicase 1 homolog...	0.03	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	IEA	Interproscan
MF	GO:0003677	DNA binding	IEA	Interproscan
MF	GO:0003678	DNA helicase activity	IEA	Interproscan
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0004386	helicase activity	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
MF	GO:0005524	ATP binding	IEA	Interproscan
BP	GO:0006139	nucleobase-containing compound metabolic process	IEA	Interproscan
BP	GO:0006725	cellular aromatic compound metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
MF	GO:0008094	ATP-dependent activity, acting on DNA	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
MF	GO:0016787	hydrolase activity	None	Extended
MF	GO:0016817	hydrolase activity, acting on acid anhydrides	None	Extended
MF	GO:0016818	hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides	IEA	Interproscan
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0030554	adenyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032559	adenyl ribonucleotide binding	None	Extended
BP	GO:0034641	cellular nitrogen compound metabolic process	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0046483	heterocycle metabolic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:0140097	catalytic activity, acting on DNA	None	Extended
MF	GO:0140640	catalytic activity, acting on a nucleic acid	None	Extended
MF	GO:0140657	ATP-dependent activity	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
BP	GO:1901360	organic cyclic compound metabolic process	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

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Type	GO Term	Name	Evidence	Source
CC	GO:0000776	kinetochore	IEP	HCCA
MF	GO:0003774	cytoskeletal motor activity	IEP	HCCA
MF	GO:0003777	microtubule motor activity	IEP	HCCA
MF	GO:0005515	protein binding	IEP	HCCA
BP	GO:0006260	DNA replication	IEP	HCCA
BP	GO:0007017	microtubule-based process	IEP	HCCA
BP	GO:0007018	microtubule-based movement	IEP	HCCA
MF	GO:0008017	microtubule binding	IEP	HCCA
MF	GO:0008092	cytoskeletal protein binding	IEP	HCCA
MF	GO:0015631	tubulin binding	IEP	HCCA
CC	GO:0031262	Ndc80 complex	IEP	HCCA
CC	GO:0043226	organelle	IEP	HCCA
CC	GO:0043229	intracellular organelle	IEP	HCCA
CC	GO:0099080	supramolecular complex	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR006555	ATP-dep_Helicase_C	645	860
IPR010614	DEAD_2	181	367

External Links

No external refs found!

Gb_07340

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation