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  5. Gb_07238

Gb_07238 (COI1)


Aliases : COI1

Description : Coronatine-insensitive protein homolog 1a OS=Oryza sativa subsp. indica (sp|a2wx30|coi1a_orysi : 212.0)


Gene families : OG0000211 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000211_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Gb_07238

Target Alias Description ECC score Gene Family Method Actions
Aev_g48573 AFB2 substrate adaptor of SCF E3 ubiquitin ligase *(TIR1/AFB)... 0.05 OrthoFinder output from all 47 species
Als_g24136 COI1 component *(COI) of jasmonic acid receptor complex &... 0.03 OrthoFinder output from all 47 species
GSVIVT01021910001 TIR1 Protein degradation.peptide tagging.Ubiquitin... 0.04 OrthoFinder output from all 47 species
Gb_30742 TIR1 Protein TRANSPORT INHIBITOR RESPONSE 1 OS=Arabidopsis... 0.05 OrthoFinder output from all 47 species
Nbi_g04893 COI1 component *(COI) of jasmonic acid receptor complex &... 0.08 OrthoFinder output from all 47 species
Ore_g04476 TIR1 substrate adaptor of SCF E3 ubiquitin ligase *(TIR1/AFB)... 0.03 OrthoFinder output from all 47 species
Ore_g13712 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003779 actin binding IEP HCCA
CC GO:0005634 nucleus IEP HCCA
MF GO:0008092 cytoskeletal protein binding IEP HCCA
CC GO:0043227 membrane-bounded organelle IEP HCCA
CC GO:0043231 intracellular membrane-bounded organelle IEP HCCA
InterPro domains Description Start Stop
IPR041101 Transp_inhibit 72 117
IPR041567 COI1_F-box 13 52
No external refs found!