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  5. Gb_07223

Gb_07223


Description : transcription factor (bHLH). transcriptional regulator (CIB)


Gene families : OG0000019 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Gb_07223

Target Alias Description ECC score Gene Family Method Actions
AT1G25330 No alias basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0.01 OrthoFinder output from all 47 species
AT1G26260 CIB5 cryptochrome-interacting basic-helix-loop-helix 5 0.03 OrthoFinder output from all 47 species
Als_g48384 LRL3 bHLH-type transcription factor & original description: none 0.01 OrthoFinder output from all 47 species
Aob_g30603 LRL3 bHLH-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g04118 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g17520 PIL5, PIF1 bHLH-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g18802 No alias regulatory protein (CIB) of blue light perception &... 0.02 OrthoFinder output from all 47 species
Ehy_g26357 HEC1 bHLH-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Gb_20300 No alias transcription factor (bHLH). transcriptional regulator (CIB) 0.04 OrthoFinder output from all 47 species
LOC_Os06g47980.1 LOC_Os06g47980 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Lfl_g40022 No alias regulatory protein (CIB) of blue light perception &... 0.02 OrthoFinder output from all 47 species
MA_10435000g0010 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Nbi_g03137 No alias regulatory protein (CIB) of blue light perception &... 0.01 OrthoFinder output from all 47 species
Nbi_g11730 No alias regulatory protein (CIB) of blue light perception &... 0.02 OrthoFinder output from all 47 species
Nbi_g16867 No alias bHLH-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g50236 PIL5, PIF1 regulatory protein *(PIF) of red/far-red light... 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0033.g011126 SPT bHLH-type transcription factor & original description: CDS=1-1488 0.02 OrthoFinder output from all 47 species
Sam_g19135 No alias bHLH-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Solyc01g107140.3.1 Solyc01g107140 transcription factor (bHLH) 0.02 OrthoFinder output from all 47 species
Solyc04g005220.3.1 Solyc04g005220 transcription factor (bHLH). transcriptional regulator (CIB) 0.02 OrthoFinder output from all 47 species
Solyc04g077960.1.1 RSL2, Solyc04g077960 transcription factor (bHLH) 0.01 OrthoFinder output from all 47 species
Solyc12g088380.1.1 RSL2, Solyc12g088380 transcription factor (bHLH) 0.02 OrthoFinder output from all 47 species
Spa_g26616 LRL3 bHLH-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g11732 HEC1 bHLH-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0046983 protein dimerization activity IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR011598 bHLH_dom 286 333
No external refs found!