Gb_07185 (GAMMA-H2AX, H2AXB,...)

Aliases : GAMMA-H2AX, H2AXB, HTA3, G-H2AX

Description : histone (H2A)

Gene families : OG0000117 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000117_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Gb_07185
Cluster	HCCA: Cluster_114

Target	Alias	Description	ECC score	Gene Family Method
Aev_g39464	HTA6	histone *(H2A) & original description: none	0.04	OrthoFinder output from all 47 species
Ala_g17952	HTA7	histone *(H2A) & original description: none	0.03	OrthoFinder output from all 47 species
Cpa\|evm.model.tig00001085.4	GAMMA-H2AX,...	Chromatin organisation.histones.H2A-type histone	0.02	OrthoFinder output from all 47 species
Ehy_g11405	HTA7	histone *(H2A) & original description: none	0.03	OrthoFinder output from all 47 species
Pnu_g10950	HTA6	histone *(H2A) & original description: none	0.03	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
CC	GO:0000786	nucleosome	IEA	Interproscan
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0032991	protein-containing complex	None	Extended
CC	GO:0032993	protein-DNA complex	None	Extended
CC	GO:0044815	DNA packaging complex	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
MF	GO:0004857	enzyme inhibitor activity	IEP	HCCA
MF	GO:0004860	protein kinase inhibitor activity	IEP	HCCA
MF	GO:0004861	cyclin-dependent protein serine/threonine kinase inhibitor activity	IEP	HCCA
CC	GO:0005634	nucleus	IEP	HCCA
MF	GO:0016538	cyclin-dependent protein serine/threonine kinase regulator activity	IEP	HCCA
MF	GO:0019207	kinase regulator activity	IEP	HCCA
MF	GO:0019210	kinase inhibitor activity	IEP	HCCA
MF	GO:0019887	protein kinase regulator activity	IEP	HCCA
MF	GO:0030234	enzyme regulator activity	IEP	HCCA
MF	GO:0030291	protein serine/threonine kinase inhibitor activity	IEP	HCCA
MF	GO:0098772	molecular function regulator activity	IEP	HCCA
MF	GO:0140678	molecular function inhibitor activity	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR032454	Histone_H2A_C	94	128
IPR007125	Histone_H2A/H2B/H3	12	91

External Links

No external refs found!