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  5. Gb_06923

Gb_06923 (ATM1)


Aliases : ATM1

Description : Myosin-1 OS=Arabidopsis thaliana (sp|q9lhe9|myo1_arath : 181.0)


Gene families : OG0000203 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000203_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Gb_06923

Target Alias Description ECC score Gene Family Method Actions
AT2G31900 XIF, ATMYO5, ATXIF myosin-like protein XIF 0.06 OrthoFinder output from all 47 species
AT2G33240 ATXID, XID myosin XI D 0.05 OrthoFinder output from all 47 species
AT5G20450 No alias CONTAINS InterPro DOMAIN/s: Dilute (InterPro:IPR002710);... 0.03 OrthoFinder output from all 47 species
Adi_g055863 XIC, ATXIC class XI myosin microfilament-based motor protein &... 0.02 OrthoFinder output from all 47 species
Adi_g117107 XIC, ATXIC class XI myosin microfilament-based motor protein &... 0.03 OrthoFinder output from all 47 species
Ala_g12224 ATXIK, XI-17, XIK class XI myosin microfilament-based motor protein &... 0.03 OrthoFinder output from all 47 species
Aob_g14483 ATXIK, XI-17, XIK class XI myosin microfilament-based motor protein &... 0.02 OrthoFinder output from all 47 species
Azfi_s0007.g011224 ATVIIIA, VIIIA not classified & original description: CDS=656-2908 0.03 OrthoFinder output from all 47 species
Cba_g14795 ATVIIIA, VIIIA not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cpa|evm.model.tig00021108.13 XIF, ATMYO5, ATXIF Myosin-9 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
Dcu_g06522 ATVIIIA, VIIIA not classified & original description: none 0.04 OrthoFinder output from all 47 species
GSVIVT01005233001 XIA, ATXIA Myosin-6 OS=Arabidopsis thaliana 0.07 OrthoFinder output from all 47 species
GSVIVT01028990001 XI-8, XI-B, XIB, ATXIB Cytoskeleton.microfilament network.myosin... 0.04 OrthoFinder output from all 47 species
LOC_Os02g57190.1 XI-8, XI-B, XIB,... class XI myosin microfilament-based motor protein 0.06 OrthoFinder output from all 47 species
Lfl_g03510 ATXIK, XI-17, XIK class XI myosin microfilament-based motor protein &... 0.02 OrthoFinder output from all 47 species
Lfl_g27695 ATVIIIA, VIIIA class VIII myosin microfilament-based motor protein &... 0.02 OrthoFinder output from all 47 species
MA_502345g0010 ATVIIIA, VIIIA Myosin-3 OS=Arabidopsis thaliana (sp|f4i507|myo3_arath : 283.0) 0.04 OrthoFinder output from all 47 species
Zm00001e009499_P001 ATMYOS1, ATM4,... Myosin-2 OS=Arabidopsis thaliana (sp|f4k0a6|myo2_arath : 173.0) 0.03 OrthoFinder output from all 47 species
Zm00001e012626_P001 ATVIIIA, VIIIA,... class VIII myosin microfilament-based motor protein 0.04 OrthoFinder output from all 47 species
Zm00001e016565_P002 Zm00001e016565 no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
Zm00001e020540_P002 ATXIK, XI-17,... class XI myosin microfilament-based motor protein 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003774 cytoskeletal motor activity IEA Interproscan
MF GO:0005524 ATP binding IEA Interproscan
CC GO:0016459 myosin complex IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR001609 Myosin_head_motor_dom 123 182
IPR001609 Myosin_head_motor_dom 23 100
No external refs found!