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  5. Gb_06851

Gb_06851 (AtTLP3, TLP3)


Aliases : AtTLP3, TLP3

Description : transcription factor (TUB)


Gene families : OG0000251 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000251_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Gb_06851

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00057p00153680 AtTLP3, TLP3,... RNA biosynthesis.transcriptional activation.TUB... 0.04 OrthoFinder output from all 47 species
AT1G76900 AtTLP1, TLP1 tubby like protein 1 0.04 OrthoFinder output from all 47 species
AT2G47900 AtTLP3, TLP3 tubby like protein 3 0.03 OrthoFinder output from all 47 species
AT5G18680 AtTLP11, TLP11 tubby like protein 11 0.04 OrthoFinder output from all 47 species
Adi_g056852 AtTLP3, TLP3 TUB-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Adi_g076987 AtTLP3, TLP3 TUB-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Als_g12652 AtTLP3, TLP3 TUB-type transcription factor & original description: none 0.08 OrthoFinder output from all 47 species
Aspi01Gene25766.t1 AtTLP3, TLP3,... TUB-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene26936.t1 AtTLP3, TLP3,... TUB-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene60509.t1 AtTLP3, TLP3,... TUB-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g12682 AtTLP3, TLP3 TUB-type transcription factor & original description: none 0.05 OrthoFinder output from all 47 species
Ehy_g04759 AtTLP3, TLP3 TUB-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g24654 TLP10, AtTLP10 TUB-type transcription factor & original description: none 0.05 OrthoFinder output from all 47 species
MA_87289g0010 AtTLP3, TLP3 transcription factor (TUB) 0.07 OrthoFinder output from all 47 species
Ore_g09550 AtTLP1, TLP1 TUB-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0168.g024249 AtTLP3, TLP3 TUB-type transcription factor & original description:... 0.03 OrthoFinder output from all 47 species
Sam_g04508 No alias TUB-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g39184 No alias TUB-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Solyc07g062390.4.1 AtTLP7, TLP7,... transcription factor (TUB) 0.04 OrthoFinder output from all 47 species
Tin_g00701 AtTLP3, TLP3 TUB-type transcription factor & original description: none 0.07 OrthoFinder output from all 47 species
Tin_g01734 AtTLP3, TLP3 TUB-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e001672_P001 AtTLP3, TLP3,... transcription factor (TUB) 0.03 OrthoFinder output from all 47 species
Zm00001e031774_P001 TLP10, AtTLP10,... transcription factor (TUB) 0.05 OrthoFinder output from all 47 species
Zm00001e032131_P001 AtTLP7, TLP7,... transcription factor (TUB) 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR001810 F-box_dom 59 109
IPR000007 Tubby_C 123 413
No external refs found!