Gb_06833 (ATPB, PB)

Aliases : ATPB, PB

Description : subunit epsilon of peripheral CF1 subcomplex of ATP synthase complex

Gene families : OG0007659 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0007659_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Gb_06833
Cluster	HCCA: Cluster_22

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00012p00184530	ATPB, PB,...	Photosynthesis.photophosphorylation.ATP synthase...	0.06	OrthoFinder output from all 47 species
ATCG00470	ATPE	ATP synthase epsilon chain	0.12	OrthoFinder output from all 47 species
Aev_g00175	ATPE	subunit epsilon of peripheral CF1 subcomplex of ATP...	0.23	OrthoFinder output from all 47 species
Aob_g00470	ATPE	subunit epsilon of peripheral CF1 subcomplex of ATP...	0.1	OrthoFinder output from all 47 species
Ceric.09G048600.1	ATPE, Ceric.09G048600	subunit epsilon of peripheral CF1 subcomplex of ATP...	0.16	OrthoFinder output from all 47 species
Ceric.1Z017800.1	ATPE, Ceric.1Z017800	subunit epsilon of peripheral CF1 subcomplex of ATP...	0.1	OrthoFinder output from all 47 species
Ceric.1Z022100.1	ATPE, Ceric.1Z022100	subunit epsilon of peripheral CF1 subcomplex of ATP...	0.03	OrthoFinder output from all 47 species
Ceric.1Z161900.1	ATPE, Ceric.1Z161900	subunit epsilon of peripheral CF1 subcomplex of ATP...	0.1	OrthoFinder output from all 47 species
Dcu_g39139	ATPE	subunit epsilon of peripheral CF1 subcomplex of ATP...	0.09	OrthoFinder output from all 47 species
LOC_Os01g58000.1	ATPE, LOC_Os01g58000	subunit epsilon of peripheral CF1 subcomplex of ATP...	0.2	OrthoFinder output from all 47 species
LOC_Os03g55874.1	ATPB, PB, LOC_Os03g55874	subunit epsilon of peripheral CF1 subcomplex of ATP...	0.15	OrthoFinder output from all 47 species
LOC_Os06g02980.1	ATPB, PB, LOC_Os06g02980	subunit epsilon of peripheral CF1 subcomplex of ATP...	0.03	OrthoFinder output from all 47 species
LOC_Os06g39756.1	ATPE, LOC_Os06g39756	subunit epsilon of peripheral CF1 subcomplex of ATP...	0.11	OrthoFinder output from all 47 species
LOC_Os10g21264.1	ATPE, LOC_Os10g21264	subunit epsilon of peripheral CF1 subcomplex of ATP...	0.01	OrthoFinder output from all 47 species
LOC_Os12g19430.1	ATPE, LOC_Os12g19430	subunit epsilon of peripheral CF1 subcomplex of ATP...	0.14	OrthoFinder output from all 47 species
Lfl_g18092	ATPE	subunit epsilon of peripheral CF1 subcomplex of ATP...	0.15	OrthoFinder output from all 47 species
Smo137774	ATPE	Photosynthesis.photophosphorylation.ATP synthase...	0.12	OrthoFinder output from all 47 species
Solyc00g500140.1.1	ATPE, Solyc00g500140	subunit epsilon of peripheral CF1 subcomplex of ATP...	0.03	OrthoFinder output from all 47 species
Zm00001e003900_P001	ATPE, Zm00001e003900	subunit epsilon of peripheral CF1 subcomplex of ATP...	0.1	OrthoFinder output from all 47 species
Zm00001e042031_P001	ATPE, Zm00001e042031	subunit epsilon of peripheral CF1 subcomplex of ATP...	0.1	OrthoFinder output from all 47 species
Zm00001e042052_P001	ATPE, Zm00001e042052	subunit epsilon of peripheral CF1 subcomplex of ATP...	0.1	OrthoFinder output from all 47 species
Zm00001e042080_P001	ATPE, Zm00001e042080	subunit epsilon of peripheral CF1 subcomplex of ATP...	0.1	OrthoFinder output from all 47 species
Zm00001e042096_P001	ATPE, Zm00001e042096	subunit epsilon of peripheral CF1 subcomplex of ATP...	0.1	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005524	ATP binding	IEA	Interproscan
BP	GO:0006139	nucleobase-containing compound metabolic process	None	Extended
BP	GO:0006163	purine nucleotide metabolic process	None	Extended
BP	GO:0006164	purine nucleotide biosynthetic process	None	Extended
BP	GO:0006725	cellular aromatic compound metabolic process	None	Extended
BP	GO:0006753	nucleoside phosphate metabolic process	None	Extended
BP	GO:0006754	ATP biosynthetic process	None	Extended
BP	GO:0006793	phosphorus metabolic process	None	Extended
BP	GO:0006796	phosphate-containing compound metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009058	biosynthetic process	None	Extended
BP	GO:0009117	nucleotide metabolic process	None	Extended
BP	GO:0009141	nucleoside triphosphate metabolic process	None	Extended
BP	GO:0009142	nucleoside triphosphate biosynthetic process	None	Extended
BP	GO:0009144	purine nucleoside triphosphate metabolic process	None	Extended
BP	GO:0009145	purine nucleoside triphosphate biosynthetic process	None	Extended
BP	GO:0009150	purine ribonucleotide metabolic process	None	Extended
BP	GO:0009152	purine ribonucleotide biosynthetic process	None	Extended
BP	GO:0009165	nucleotide biosynthetic process	None	Extended
BP	GO:0009199	ribonucleoside triphosphate metabolic process	None	Extended
BP	GO:0009201	ribonucleoside triphosphate biosynthetic process	None	Extended
BP	GO:0009205	purine ribonucleoside triphosphate metabolic process	None	Extended
BP	GO:0009206	purine ribonucleoside triphosphate biosynthetic process	None	Extended
BP	GO:0009259	ribonucleotide metabolic process	None	Extended
BP	GO:0009260	ribonucleotide biosynthetic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0015986	proton motive force-driven ATP synthesis	IEA	Interproscan
MF	GO:0017076	purine nucleotide binding	None	Extended
BP	GO:0018130	heterocycle biosynthetic process	None	Extended
BP	GO:0019438	aromatic compound biosynthetic process	None	Extended
BP	GO:0019637	organophosphate metabolic process	None	Extended
BP	GO:0019693	ribose phosphate metabolic process	None	Extended
MF	GO:0030554	adenyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032559	adenyl ribonucleotide binding	None	Extended
BP	GO:0034641	cellular nitrogen compound metabolic process	None	Extended
BP	GO:0034654	nucleobase-containing compound biosynthetic process	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044249	cellular biosynthetic process	None	Extended
BP	GO:0044271	cellular nitrogen compound biosynthetic process	None	Extended
BP	GO:0044281	small molecule metabolic process	None	Extended
BP	GO:0046034	ATP metabolic process	None	Extended
BP	GO:0046390	ribose phosphate biosynthetic process	None	Extended
BP	GO:0046483	heterocycle metabolic process	None	Extended
BP	GO:0055086	nucleobase-containing small molecule metabolic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:0072521	purine-containing compound metabolic process	None	Extended
BP	GO:0072522	purine-containing compound biosynthetic process	None	Extended
BP	GO:0090407	organophosphate biosynthetic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
BP	GO:1901135	carbohydrate derivative metabolic process	None	Extended
BP	GO:1901137	carbohydrate derivative biosynthetic process	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
BP	GO:1901293	nucleoside phosphate biosynthetic process	None	Extended
BP	GO:1901360	organic cyclic compound metabolic process	None	Extended
BP	GO:1901362	organic cyclic compound biosynthetic process	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended
BP	GO:1901566	organonitrogen compound biosynthetic process	None	Extended
BP	GO:1901576	organic substance biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0003954	NADH dehydrogenase activity	IEP	HCCA
MF	GO:0003955	NAD(P)H dehydrogenase (quinone) activity	IEP	HCCA
MF	GO:0005215	transporter activity	IEP	HCCA
CC	GO:0005575	cellular_component	IEP	HCCA
BP	GO:0006091	generation of precursor metabolites and energy	IEP	HCCA
BP	GO:0006397	mRNA processing	IEP	HCCA
BP	GO:0006778	porphyrin-containing compound metabolic process	IEP	HCCA
BP	GO:0006779	porphyrin-containing compound biosynthetic process	IEP	HCCA
BP	GO:0006811	monoatomic ion transport	IEP	HCCA
BP	GO:0006812	monoatomic cation transport	IEP	HCCA
MF	GO:0008137	NADH dehydrogenase (ubiquinone) activity	IEP	HCCA
MF	GO:0009055	electron transfer activity	IEP	HCCA
CC	GO:0009521	photosystem	IEP	HCCA
BP	GO:0009767	photosynthetic electron transport chain	IEP	HCCA
BP	GO:0009772	photosynthetic electron transport in photosystem II	IEP	HCCA
MF	GO:0015399	primary active transmembrane transporter activity	IEP	HCCA
MF	GO:0015453	oxidoreduction-driven active transmembrane transporter activity	IEP	HCCA
BP	GO:0015979	photosynthesis	IEP	HCCA
BP	GO:0015994	chlorophyll metabolic process	IEP	HCCA
BP	GO:0015995	chlorophyll biosynthetic process	IEP	HCCA
CC	GO:0016020	membrane	IEP	HCCA
BP	GO:0016071	mRNA metabolic process	IEP	HCCA
MF	GO:0016168	chlorophyll binding	IEP	HCCA
MF	GO:0016491	oxidoreductase activity	IEP	HCCA
MF	GO:0016651	oxidoreductase activity, acting on NAD(P)H	IEP	HCCA
MF	GO:0016655	oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor	IEP	HCCA
BP	GO:0019684	photosynthesis, light reaction	IEP	HCCA
MF	GO:0019843	rRNA binding	IEP	HCCA
MF	GO:0022804	active transmembrane transporter activity	IEP	HCCA
MF	GO:0022857	transmembrane transporter activity	IEP	HCCA
BP	GO:0022900	electron transport chain	IEP	HCCA
CC	GO:0032991	protein-containing complex	IEP	HCCA
BP	GO:0033013	tetrapyrrole metabolic process	IEP	HCCA
BP	GO:0033014	tetrapyrrole biosynthetic process	IEP	HCCA
BP	GO:0034220	monoatomic ion transmembrane transport	IEP	HCCA
BP	GO:0042440	pigment metabolic process	IEP	HCCA
MF	GO:0045156	electron transporter, transferring electrons within the cyclic electron transport pathway of photosynthesis activity	IEP	HCCA
BP	GO:0046148	pigment biosynthetic process	IEP	HCCA
MF	GO:0046906	tetrapyrrole binding	IEP	HCCA
MF	GO:0048038	quinone binding	IEP	HCCA
MF	GO:0050136	NADH dehydrogenase (quinone) activity	IEP	HCCA
MF	GO:0051287	NAD binding	IEP	HCCA
MF	GO:0051536	iron-sulfur cluster binding	IEP	HCCA
MF	GO:0051540	metal cluster binding	IEP	HCCA
BP	GO:0055085	transmembrane transport	IEP	HCCA
BP	GO:0055114	obsolete oxidation-reduction process	IEP	HCCA
BP	GO:0098655	monoatomic cation transmembrane transport	IEP	HCCA
BP	GO:0098660	inorganic ion transmembrane transport	IEP	HCCA
BP	GO:0098662	inorganic cation transmembrane transport	IEP	HCCA
CC	GO:0098796	membrane protein complex	IEP	HCCA
CC	GO:0110165	cellular anatomical entity	IEP	HCCA
BP	GO:1902600	proton transmembrane transport	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR000194	ATPase_F1/V1/A1_a/bsu_nucl-bd	4	175
IPR020547	ATP_synth_F1_esu_C	251	294
IPR020546	ATP_synth_F1_dsu/esu_N	184	246

External Links

No external refs found!

Gb_06833 (ATPB, PB)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation