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  5. Gb_06123

Gb_06123


Description : no hits & (original description: none)


Gene families : OG0000195 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000195_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Gb_06123
Cluster HCCA: Cluster_142

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00002p00228410 evm_27.TU.AmTr_v1... No description available 0.03 OrthoFinder output from all 47 species
AMTR_s00002p00272110 evm_27.TU.AmTr_v1... No description available 0.06 OrthoFinder output from all 47 species
AMTR_s00002p00272120 evm_27.TU.AmTr_v1... Cell wall.cell wall proteins.hydroxyproline-rich... 0.05 OrthoFinder output from all 47 species
AMTR_s00006p00264910 evm_27.TU.AmTr_v1... No description available 0.04 OrthoFinder output from all 47 species
AMTR_s00048p00225010 evm_27.TU.AmTr_v1... Cell wall.cell wall proteins.hydroxyproline-rich... 0.04 OrthoFinder output from all 47 species
AMTR_s00119p00120480 evm_27.TU.AmTr_v1... Cell wall.cell wall proteins.hydroxyproline-rich... 0.02 OrthoFinder output from all 47 species
AMTR_s01773p00009760 evm_27.TU.AmTr_v1... No description available 0.03 OrthoFinder output from all 47 species
AT1G03103 No alias Bifunctional inhibitor/lipid-transfer protein/seed... 0.03 OrthoFinder output from all 47 species
AT1G05450 No alias Bifunctional inhibitor/lipid-transfer protein/seed... 0.05 OrthoFinder output from all 47 species
AT1G55260 No alias Bifunctional inhibitor/lipid-transfer protein/seed... 0.05 OrthoFinder output from all 47 species
AT1G73550 No alias Bifunctional inhibitor/lipid-transfer protein/seed... 0.02 OrthoFinder output from all 47 species
AT1G73560 No alias Bifunctional inhibitor/lipid-transfer protein/seed... 0.03 OrthoFinder output from all 47 species
AT1G73890 No alias Bifunctional inhibitor/lipid-transfer protein/seed... 0.05 OrthoFinder output from all 47 species
AT2G13820 No alias Bifunctional inhibitor/lipid-transfer protein/seed... 0.04 OrthoFinder output from all 47 species
AT2G27130 No alias Bifunctional inhibitor/lipid-transfer protein/seed... 0.04 OrthoFinder output from all 47 species
AT2G44300 No alias Bifunctional inhibitor/lipid-transfer protein/seed... 0.03 OrthoFinder output from all 47 species
AT2G48130 No alias Bifunctional inhibitor/lipid-transfer protein/seed... 0.02 OrthoFinder output from all 47 species
AT2G48140 EDA4 Bifunctional inhibitor/lipid-transfer protein/seed... 0.06 OrthoFinder output from all 47 species
AT3G22580 No alias Bifunctional inhibitor/lipid-transfer protein/seed... 0.03 OrthoFinder output from all 47 species
AT3G22600 No alias Bifunctional inhibitor/lipid-transfer protein/seed... 0.04 OrthoFinder output from all 47 species
AT3G22620 No alias Bifunctional inhibitor/lipid-transfer protein/seed... 0.05 OrthoFinder output from all 47 species
AT3G43720 No alias Bifunctional inhibitor/lipid-transfer protein/seed... 0.04 OrthoFinder output from all 47 species
AT3G58550 No alias Bifunctional inhibitor/lipid-transfer protein/seed... 0.07 OrthoFinder output from all 47 species
AT4G14815 No alias Bifunctional inhibitor/lipid-transfer protein/seed... 0.05 OrthoFinder output from all 47 species
AT5G13900 No alias Bifunctional inhibitor/lipid-transfer protein/seed... 0.02 OrthoFinder output from all 47 species
Adi_g116254 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g42840 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g36424 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g23852 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Aop_g06034 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g07621 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g15133 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene03812.t1 Aspi01Gene03812 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene03814.t1 Aspi01Gene03814 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene12060.t1 Aspi01Gene12060 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene13486.t1 Aspi01Gene13486 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene29219.t1 Aspi01Gene29219 arabinogalactan protein *(Xylogen) & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene33061.t1 Aspi01Gene33061 arabinogalactan protein *(Xylogen) & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene44733.t1 Aspi01Gene44733 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene55567.t1 Aspi01Gene55567 arabinogalactan protein *(Xylogen) & original description: none 0.04 OrthoFinder output from all 47 species
Azfi_s0009.g012021 No alias not classified & original description: CDS=95-559 0.02 OrthoFinder output from all 47 species
Azfi_s0011.g012661 LTPG1 not classified & original description: CDS=60-632 0.04 OrthoFinder output from all 47 species
Azfi_s0054.g033619 No alias not classified & original description: CDS=1-465 0.05 OrthoFinder output from all 47 species
Azfi_s0054.g033620 No alias not classified & original description: CDS=175-666 0.03 OrthoFinder output from all 47 species
Cba_g01588 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.01G082200.1 Ceric.01G082200 not classified & original description: pacid=50591603... 0.03 OrthoFinder output from all 47 species
Ceric.12G092300.1 Ceric.12G092300 not classified & original description: pacid=50600852... 0.02 OrthoFinder output from all 47 species
Ceric.12G092700.1 Ceric.12G092700 not classified & original description: pacid=50601364... 0.03 OrthoFinder output from all 47 species
Ceric.35G030300.1 Ceric.35G030300 not classified & original description: pacid=50581753... 0.05 OrthoFinder output from all 47 species
Dac_g37270 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g06089 LTPG1 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g51727 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g06369 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01001178001 No alias Cell wall.cell wall proteins.hydroxyproline-rich... 0.08 OrthoFinder output from all 47 species
GSVIVT01001181001 EDA4 No description available 0.08 OrthoFinder output from all 47 species
GSVIVT01001350001 No alias Cell wall.cell wall proteins.hydroxyproline-rich... 0.04 OrthoFinder output from all 47 species
GSVIVT01008272001 No alias Cell wall.cell wall proteins.hydroxyproline-rich... 0.05 OrthoFinder output from all 47 species
GSVIVT01018008001 No alias Cell wall.cell wall proteins.hydroxyproline-rich... 0.09 OrthoFinder output from all 47 species
GSVIVT01018010001 No alias No description available 0.08 OrthoFinder output from all 47 species
GSVIVT01025408001 No alias Cell wall.cell wall proteins.hydroxyproline-rich... 0.01 OrthoFinder output from all 47 species
GSVIVT01025413001 No alias Cell wall.cell wall proteins.hydroxyproline-rich... 0.03 OrthoFinder output from all 47 species
GSVIVT01032956001 No alias Lipid transfer-like protein VAS OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
Gb_24349 No alias xylogen-type arabinogalactan protein 0.11 OrthoFinder output from all 47 species
LOC_Os01g59870.1 LOC_Os01g59870 xylogen-type arabinogalactan protein 0.03 OrthoFinder output from all 47 species
LOC_Os03g20760.1 LOC_Os03g20760 xylogen-type arabinogalactan protein 0.03 OrthoFinder output from all 47 species
LOC_Os03g57970.2 LOC_Os03g57970 xylogen-type arabinogalactan protein 0.04 OrthoFinder output from all 47 species
LOC_Os03g57980.1 LOC_Os03g57980 no hits & (original description: none) 0.06 OrthoFinder output from all 47 species
LOC_Os03g57990.1 LOC_Os03g57990 xylogen-type arabinogalactan protein 0.02 OrthoFinder output from all 47 species
LOC_Os03g58940.1 LOC_Os03g58940 xylogen-type arabinogalactan protein 0.04 OrthoFinder output from all 47 species
LOC_Os06g49770.1 LOC_Os06g49770 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
LOC_Os07g07790.1 LOC_Os07g07790 xylogen-type arabinogalactan protein 0.06 OrthoFinder output from all 47 species
LOC_Os07g07860.1 LOC_Os07g07860 xylogen-type arabinogalactan protein 0.03 OrthoFinder output from all 47 species
LOC_Os07g07920.1 EDA4, LOC_Os07g07920 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
LOC_Os07g07930.1 LOC_Os07g07930 xylogen-type arabinogalactan protein 0.03 OrthoFinder output from all 47 species
LOC_Os07g09970.1 LOC_Os07g09970 xylogen-type arabinogalactan protein 0.02 OrthoFinder output from all 47 species
LOC_Os10g11370.1 LOC_Os10g11370 no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
LOC_Os11g37280.1 LOC_Os11g37280 Non-specific lipid-transfer protein C6 OS=Oryza sativa... 0.03 OrthoFinder output from all 47 species
MA_113140g0010 No alias no hits & (original description: none) 0.06 OrthoFinder output from all 47 species
MA_115537g0010 No alias no hits & (original description: none) 0.08 OrthoFinder output from all 47 species
MA_124502g0010 No alias xylogen-type arabinogalactan protein 0.04 OrthoFinder output from all 47 species
MA_133359g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
MA_139470g0010 No alias xylogen-type arabinogalactan protein 0.05 OrthoFinder output from all 47 species
MA_1925g0010 No alias no hits & (original description: none) 0.06 OrthoFinder output from all 47 species
MA_19325g0010 No alias xylogen-type arabinogalactan protein 0.06 OrthoFinder output from all 47 species
MA_26320g0020 No alias no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
MA_26320g0030 No alias no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
MA_383975g0010 No alias no hits & (original description: none) 0.07 OrthoFinder output from all 47 species
MA_494876g0010 No alias xylogen-type arabinogalactan protein 0.05 OrthoFinder output from all 47 species
MA_50191g0010 No alias no hits & (original description: none) 0.07 OrthoFinder output from all 47 species
MA_5581g0010 No alias xylogen-type arabinogalactan protein 0.07 OrthoFinder output from all 47 species
MA_64802g0020 No alias no hits & (original description: none) 0.07 OrthoFinder output from all 47 species
MA_71069g0010 No alias xylogen-type arabinogalactan protein 0.04 OrthoFinder output from all 47 species
MA_76307g0020 No alias no hits & (original description: none) 0.06 OrthoFinder output from all 47 species
MA_8892965g0010 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
MA_9903145g0010 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Mp8g18180.1 No alias xylogen-type arabinogalactan protein 0.04 OrthoFinder output from all 47 species
Msp_g06695 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g04557 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g27615 No alias arabinogalactan protein *(Xylogen) & original description: none 0.05 OrthoFinder output from all 47 species
Nbi_g28322 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g04354 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g04355 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g28932 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g30807 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g41775 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g31936 No alias arabinogalactan protein *(Xylogen) & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g61681 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0022.g008667 No alias not classified & original description: CDS=1-402 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0056.g014611 No alias arabinogalactan protein *(Xylogen) & original... 0.05 OrthoFinder output from all 47 species
Sacu_v1.1_s0073.g017064 No alias arabinogalactan protein *(Xylogen) & original... 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s2896.g028490 No alias not classified & original description: CDS=1-624 0.03 OrthoFinder output from all 47 species
Solyc01g005985.1.1 Solyc01g005985 xylogen-type arabinogalactan protein 0.05 OrthoFinder output from all 47 species
Solyc01g073680.4.1 Solyc01g073680 xylogen-type arabinogalactan protein 0.05 OrthoFinder output from all 47 species
Solyc01g103060.4.1 Solyc01g103060 Lipid transfer-like protein VAS OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
Solyc03g005200.3.1 Solyc03g005200 xylogen-type arabinogalactan protein 0.05 OrthoFinder output from all 47 species
Solyc03g005210.4.1 Solyc03g005210 no hits & (original description: none) 0.07 OrthoFinder output from all 47 species
Solyc03g119620.1.1 Solyc03g119620 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Solyc06g054030.2.1 Solyc06g054030 xylogen-type arabinogalactan protein 0.08 OrthoFinder output from all 47 species
Solyc06g054060.1.1 Solyc06g054060 xylogen-type arabinogalactan protein 0.04 OrthoFinder output from all 47 species
Solyc06g069110.4.1 Solyc06g069110 xylogen-type arabinogalactan protein 0.04 OrthoFinder output from all 47 species
Solyc08g007460.3.1 Solyc08g007460 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Solyc09g065410.4.1 Solyc09g065410 xylogen-type arabinogalactan protein 0.04 OrthoFinder output from all 47 species
Solyc09g065420.3.1 Solyc09g065420 xylogen-type arabinogalactan protein 0.05 OrthoFinder output from all 47 species
Solyc09g065430.4.1 Solyc09g065430 xylogen-type arabinogalactan protein 0.05 OrthoFinder output from all 47 species
Solyc09g065440.4.1 EDA4, Solyc09g065440 no hits & (original description: none) 0.07 OrthoFinder output from all 47 species
Solyc09g082280.3.1 Solyc09g082280 xylogen-type arabinogalactan protein 0.04 OrthoFinder output from all 47 species
Solyc09g082290.3.1 Solyc09g082290 no hits & (original description: none) 0.08 OrthoFinder output from all 47 species
Solyc09g082300.3.1 EDA4, Solyc09g082300 no hits & (original description: none) 0.08 OrthoFinder output from all 47 species
Spa_g11499 No alias arabinogalactan protein *(Xylogen) & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g25113 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g30752 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g13589 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Zm00001e001853_P001 Zm00001e001853 no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
Zm00001e005336_P001 Zm00001e005336 xylogen-type arabinogalactan protein 0.05 OrthoFinder output from all 47 species
Zm00001e005959_P003 Zm00001e005959 xylogen-type arabinogalactan protein 0.06 OrthoFinder output from all 47 species
Zm00001e005960_P003 EDA4, Zm00001e005960 no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
Zm00001e005961_P001 Zm00001e005961 xylogen-type arabinogalactan protein 0.06 OrthoFinder output from all 47 species
Zm00001e006054_P001 Zm00001e006054 xylogen-type arabinogalactan protein 0.02 OrthoFinder output from all 47 species
Zm00001e011462_P001 Zm00001e011462 xylogen-type arabinogalactan protein 0.02 OrthoFinder output from all 47 species
Zm00001e011463_P001 Zm00001e011463 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Zm00001e011883_P002 Zm00001e011883 xylogen-type arabinogalactan protein 0.03 OrthoFinder output from all 47 species
Zm00001e028880_P001 Zm00001e028880 xylogen-type arabinogalactan protein 0.05 OrthoFinder output from all 47 species
Zm00001e032912_P001 Zm00001e032912 no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
Zm00001e038813_P001 Zm00001e038813 xylogen-type arabinogalactan protein 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0003885 D-arabinono-1,4-lactone oxidase activity IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005506 iron ion binding IEP HCCA
BP GO:0006629 lipid metabolic process IEP HCCA
MF GO:0010333 terpene synthase activity IEP HCCA
MF GO:0016491 oxidoreductase activity IEP HCCA
MF GO:0016614 oxidoreductase activity, acting on CH-OH group of donors IEP HCCA
MF GO:0016651 oxidoreductase activity, acting on NAD(P)H IEP HCCA
MF GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEP HCCA
MF GO:0016838 carbon-oxygen lyase activity, acting on phosphates IEP HCCA
MF GO:0016899 oxidoreductase activity, acting on the CH-OH group of donors, oxygen as acceptor IEP HCCA
MF GO:0020037 heme binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043168 anion binding IEP HCCA
MF GO:0043169 cation binding IEP HCCA
MF GO:0046872 metal ion binding IEP HCCA
MF GO:0046906 tetrapyrrole binding IEP HCCA
MF GO:0046914 transition metal ion binding IEP HCCA
MF GO:0050660 flavin adenine dinucleotide binding IEP HCCA
MF GO:0050664 oxidoreductase activity, acting on NAD(P)H, oxygen as acceptor IEP HCCA
BP GO:0055114 obsolete oxidation-reduction process IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
InterPro domains Description Start Stop
IPR016140 Bifunc_inhib/LTP/seed_store 28 115
No external refs found!