Gb_06104


Description : Pentatricopeptide repeat-containing protein At4g30825, chloroplastic OS=Arabidopsis thaliana (sp|o65567|pp342_arath : 798.0)


Gene families : OG0005967 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0005967_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Gb_06104

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00065p00020910 evm_27.TU.AmTr_v1... Pentatricopeptide repeat-containing protein At4g30825,... 0.04 OrthoFinder output from all 47 species
AT4G30825 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.04 OrthoFinder output from all 47 species
Aev_g01555 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g01078 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g07385 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g06462 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ehy_g05044 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
GSVIVT01014050001 No alias Pentatricopeptide repeat-containing protein At4g30825,... 0.03 OrthoFinder output from all 47 species
LOC_Os09g25550.1 LOC_Os09g25550 Pentatricopeptide repeat-containing protein At4g30825,... 0.03 OrthoFinder output from all 47 species
Len_g20786 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
MA_187850g0010 No alias Pentatricopeptide repeat-containing protein At4g30825,... 0.06 OrthoFinder output from all 47 species
Pir_g58424 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g09709 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g13761 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g52939 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e040095_P002 Zm00001e040095 Pentatricopeptide repeat-containing protein At4g30825,... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 802 844
IPR002885 Pentatricopeptide_repeat 483 530
IPR033443 PPR_long 321 462
IPR002885 Pentatricopeptide_repeat 730 757
IPR002885 Pentatricopeptide_repeat 770 794
IPR002885 Pentatricopeptide_repeat 699 723
IPR002885 Pentatricopeptide_repeat 646 695
IPR002885 Pentatricopeptide_repeat 892 951
IPR002885 Pentatricopeptide_repeat 961 1019
No external refs found!