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  5. Gb_06017

Gb_06017 (ORF170)


Aliases : ORF170

Description : Retrovirus-related Pol polyprotein from transposon RE1 OS=Arabidopsis thaliana (sp|q94hw2|polr1_arath : 113.0)


Gene families : OG0000012 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Gb_06017
Cluster HCCA: Cluster_25

Target Alias Description ECC score Gene Family Method Actions
Adi_g007169 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g012944 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g017761 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Adi_g034589 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g12903 ORF240B not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g20689 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g34876 CRK8 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g37073 CRK8 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g39335 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g16853 CRK8 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g21842 ORF240B not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g22252 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene49099.t1 CRK8, Aspi01Gene49099 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g78076 CRK8 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g78990 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Gb_00282 CRK8 Retrovirus-related Pol polyprotein from transposon RE1... 0.06 OrthoFinder output from all 47 species
Gb_01474 No alias Retrovirus-related Pol polyprotein from transposon TNT... 0.03 OrthoFinder output from all 47 species
Gb_02012 CRK8 Retrovirus-related Pol polyprotein from transposon RE1... 0.06 OrthoFinder output from all 47 species
Gb_02021 CRK8 Retrovirus-related Pol polyprotein from transposon RE1... 0.03 OrthoFinder output from all 47 species
Gb_04117 ORF240B Retrovirus-related Pol polyprotein from transposon RE1... 0.03 OrthoFinder output from all 47 species
Gb_04521 ORF170 Uncharacterized mitochondrial protein AtMg00820... 0.07 OrthoFinder output from all 47 species
Gb_04681 CRK8 Uncharacterized mitochondrial protein AtMg00820... 0.08 OrthoFinder output from all 47 species
Gb_04925 No alias no hits & (original description: none) 0.07 OrthoFinder output from all 47 species
Gb_05080 No alias Retrovirus-related Pol polyprotein from transposon TNT... 0.04 OrthoFinder output from all 47 species
Gb_05496 CRK8 Retrovirus-related Pol polyprotein from transposon TNT... 0.05 OrthoFinder output from all 47 species
Gb_06309 CRK8 Retrovirus-related Pol polyprotein from transposon RE1... 0.05 OrthoFinder output from all 47 species
Gb_07945 No alias Retrovirus-related Pol polyprotein from transposon TNT... 0.04 OrthoFinder output from all 47 species
Gb_08011 ORF170 Retrovirus-related Pol polyprotein from transposon RE1... 0.03 OrthoFinder output from all 47 species
Gb_08791 No alias Retrovirus-related Pol polyprotein from transposon TNT... 0.04 OrthoFinder output from all 47 species
Gb_17136 No alias Retrovirus-related Pol polyprotein from transposon TNT... 0.05 OrthoFinder output from all 47 species
Gb_17625 No alias no hits & (original description: none) 0.07 OrthoFinder output from all 47 species
Gb_19564 No alias Retrovirus-related Pol polyprotein from transposon TNT... 0.09 OrthoFinder output from all 47 species
Gb_21999 No alias Retrovirus-related Pol polyprotein from transposon TNT... 0.04 OrthoFinder output from all 47 species
Gb_30484 No alias no hits & (original description: none) 0.07 OrthoFinder output from all 47 species
Gb_31472 CRK8 Retrovirus-related Pol polyprotein from transposon TNT... 0.04 OrthoFinder output from all 47 species
Gb_33613 No alias no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
Gb_33741 ORF170 Retrovirus-related Pol polyprotein from transposon TNT... 0.07 OrthoFinder output from all 47 species
Gb_36407 No alias no hits & (original description: none) 0.06 OrthoFinder output from all 47 species
Msp_g28955 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pp3c4_30930V3.1 Pp3c4_30930 No annotation 0.03 OrthoFinder output from all 47 species
Sam_g38776 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g16100 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003924 GTPase activity IEP HCCA
InterPro domains Description Start Stop
IPR013103 RVT_2 58 150
No external refs found!