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  5. Gb_05576

Gb_05576 (TRZ1, NUZ)


Aliases : TRZ1, NUZ

Description : endoribonuclease (RNase Z)


Gene families : OG0003099 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003099_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Gb_05576
Cluster HCCA: Cluster_165

Target Alias Description ECC score Gene Family Method Actions
AT1G74700 TRZ1, NUZ tRNAse Z1 0.02 OrthoFinder output from all 47 species
AT2G04530 CPZ, TRZ2 Metallo-hydrolase/oxidoreductase superfamily protein 0.08 OrthoFinder output from all 47 species
GSVIVT01030538001 CPZ, TRZ2 RNA processing.ribonuclease activities.RNase Z endoribonuclease 0.03 OrthoFinder output from all 47 species
LOC_Os09g30466.1 CPZ, TRZ2, LOC_Os09g30466 endoribonuclease (RNase Z) 0.04 OrthoFinder output from all 47 species
Solyc05g055350.3.1 CPZ, TRZ2, Solyc05g055350 endoribonuclease (RNase Z) 0.07 OrthoFinder output from all 47 species
Zm00001e034500_P002 CPZ, TRZ2, Zm00001e034500 endoribonuclease (RNase Z) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEP HCCA
MF GO:0008173 RNA methyltransferase activity IEP HCCA
InterPro domains Description Start Stop
IPR001279 Metallo-B-lactamas 189 389
No external refs found!