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  5. Gb_05385

Gb_05385


Description : RHA2 signal transducer of abscisic acid perception


Gene families : OG0000008 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Gb_05385

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00006p00267830 evm_27.TU.AmTr_v1... Nutrient uptake.iron uptake.regulation.IDF1 IRT1-ubiquitin ligase 0.05 OrthoFinder output from all 47 species
Ala_g10391 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.02 OrthoFinder output from all 47 species
Als_g02285 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.01 OrthoFinder output from all 47 species
Als_g15749 RHA3A not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g23534 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.04 OrthoFinder output from all 47 species
Als_g31953 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.03 OrthoFinder output from all 47 species
Als_g34929 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.01 OrthoFinder output from all 47 species
Aob_g05022 ATL2, TL2 RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.02 OrthoFinder output from all 47 species
Aop_g18398 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.02 OrthoFinder output from all 47 species
Aop_g37994 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g38020 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.02 OrthoFinder output from all 47 species
Aspi01Gene28289.t1 Aspi01Gene28289 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene36586.t1 Aspi01Gene36586 RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.01 OrthoFinder output from all 47 species
Aspi01Gene46827.t1 ATL2, TL2,... RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.02 OrthoFinder output from all 47 species
Aspi01Gene52668.t1 ATL2, TL2,... RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.01 OrthoFinder output from all 47 species
Ceric.18G057500.1 Ceric.18G057500 RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.01 OrthoFinder output from all 47 species
Ceric.21G001000.1 ATL2, TL2,... RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.02 OrthoFinder output from all 47 species
Ceric.21G001100.1 ATL2, TL2,... RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.02 OrthoFinder output from all 47 species
Ceric.25G002800.1 Ceric.25G002800 not classified & original description: pacid=50594229... 0.02 OrthoFinder output from all 47 species
Ceric.36G023100.1 Ceric.36G023100 not classified & original description: pacid=50568780... 0.01 OrthoFinder output from all 47 species
Dac_g17912 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g41981 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dac_g44213 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g23802 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.02 OrthoFinder output from all 47 species
Ehy_g06581 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.03 OrthoFinder output from all 47 species
Gb_41385 No alias RING-H2-class E3 ligase 0.03 OrthoFinder output from all 47 species
LOC_Os02g15060.1 LOC_Os02g15060 RING-H2-class E3 ligase 0.02 OrthoFinder output from all 47 species
LOC_Os02g52210.1 ATL31, CNI1,... RING-H2-class E3 ligase 0.02 OrthoFinder output from all 47 species
Len_g18467 ATL2, TL2 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Len_g29872 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
MA_10436028g0010 No alias RING-H2-class E3 ligase 0.07 OrthoFinder output from all 47 species
Msp_g33332 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.02 OrthoFinder output from all 47 species
Msp_g39033 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.02 OrthoFinder output from all 47 species
Ore_g18004 ATL5 RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.03 OrthoFinder output from all 47 species
Ore_g32541 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.03 OrthoFinder output from all 47 species
Ore_g41833 ATL2, TL2 RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.12 OrthoFinder output from all 47 species
Ppi_g08523 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.03 OrthoFinder output from all 47 species
Ppi_g09527 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.01 OrthoFinder output from all 47 species
Sacu_v1.1_s0049.g013649 ATL4, TL4 not classified & original description: CDS=1-891 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0081.g018006 XERICO not classified & original description: CDS=1-537 0.03 OrthoFinder output from all 47 species
Solyc01g091770.4.1 Solyc01g091770 RING-H2-class E3 ligase 0.02 OrthoFinder output from all 47 species
Solyc01g095810.3.1 Solyc01g095810 RING-H2-class E3 ligase 0.02 OrthoFinder output from all 47 species
Solyc10g081790.1.1 Solyc10g081790 RING-H2-class E3 ligase 0.01 OrthoFinder output from all 47 species
Spa_g29391 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g12404 No alias not classified & original description: none 0.08 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR001841 Znf_RING 53 96
No external refs found!