1. Home
  2. Species
  3. Ginkgo biloba
  4. Sequence
  5. Gb_05233

Gb_05233


Description : transcription factor (bHLH)


Gene families : OG0000321 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000321_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Gb_05233
Cluster HCCA: Cluster_142

Target Alias Description ECC score Gene Family Method Actions
Aev_g14705 No alias bHLH-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g18611 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g38416 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g39128 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Aev_g39457 BHLH101 bHLH-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g22340 No alias bHLH-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Als_g08674 No alias bHLH-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Als_g13118 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g36790 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g06911 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g03657 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene17268.t1 Aspi01Gene17268 bHLH-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene56005.t1 NAI1, Aspi01Gene56005 bHLH-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene62024.t1 Aspi01Gene62024 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0194.g057168 No alias bHLH-type transcription factor & original description:... 0.05 OrthoFinder output from all 47 species
Azfi_s0387.g067575 No alias bHLH-type transcription factor & original description:... 0.04 OrthoFinder output from all 47 species
Azfi_s1563.g104340 No alias not classified & original description: CDS=203-454 0.04 OrthoFinder output from all 47 species
Cba_g03232 ZOU, RGE1 bHLH-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.09G089000.1 Ceric.09G089000 bHLH-type transcription factor & original description:... 0.04 OrthoFinder output from all 47 species
Dcu_g18956 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g31728 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Len_g02041 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g04739 ZOU, RGE1 bHLH-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Lfl_g10488 No alias bHLH-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g26750 No alias bHLH-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
MA_14104g0010 SPT transcription factor (bHLH) 0.04 OrthoFinder output from all 47 species
Ore_g06468 No alias bHLH-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g06014 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pnu_g02016 No alias bHLH-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g63587 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0034.g011220 ZOU, RGE1 bHLH-type transcription factor & original description: CDS=1-1275 0.03 OrthoFinder output from all 47 species
Sam_g13612 No alias bHLH-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g19023 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Smo421249 LRL3 RNA biosynthesis.transcriptional activation.bHLH... 0.03 OrthoFinder output from all 47 species
Spa_g42092 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g45468 No alias bHLH-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0046983 protein dimerization activity IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0005509 calcium ion binding IEP HCCA
BP GO:0007165 signal transduction IEP HCCA
MF GO:0043531 ADP binding IEP HCCA
InterPro domains Description Start Stop
IPR011598 bHLH_dom 2 48
No external refs found!