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  5. Gb_04492

Gb_04492


Description : WTF9 mitochondrial RNA splicing factor


Gene families : OG0001514 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001514_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Gb_04492

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00017p00179100 evm_27.TU.AmTr_v1... Protein WHATS THIS FACTOR 1 homolog OS=Arabidopsis thaliana 0.04 OrthoFinder output from all 47 species
AMTR_s00203p00009790 evm_27.TU.AmTr_v1... Protein WHATS THIS FACTOR 1 homolog OS=Oryza sativa... 0.03 OrthoFinder output from all 47 species
AT2G39120 No alias Ubiquitin carboxyl-terminal hydrolase family protein 0.03 OrthoFinder output from all 47 species
AT3G58520 No alias Ubiquitin carboxyl-terminal hydrolase family protein 0.05 OrthoFinder output from all 47 species
Als_g13696 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g25571 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g03766 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g12385 RPD1 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g01416 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dcu_g06882 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ehy_g23978 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
LOC_Os01g18880.2 LOC_Os01g18880 Protein WHATS THIS FACTOR 1 homolog OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
LOC_Os02g32540.1 LOC_Os02g32540 no description available(sp|q9zuz6|wtf9_arath : 134.0) 0.04 OrthoFinder output from all 47 species
LOC_Os03g57270.1 LOC_Os03g57270 WTF9 mitochondrial RNA splicing factor 0.03 OrthoFinder output from all 47 species
Len_g07210 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
MA_456914g0010 No alias no description available(sp|q9zuz6|wtf9_arath : 228.0) 0.04 OrthoFinder output from all 47 species
Pir_g09504 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g53712 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Sam_g13775 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Solyc04g071290.4.1 Solyc04g071290 Protein WHATS THIS FACTOR 1 homolog OS=Oryza sativa... 0.04 OrthoFinder output from all 47 species
Solyc10g079160.1.1 Solyc10g079160 WTF9 mitochondrial RNA splicing factor 0.04 OrthoFinder output from all 47 species
Solyc11g019970.3.1 Solyc11g019970 no description available(sp|q9zuz6|wtf9_arath : 243.0) 0.03 OrthoFinder output from all 47 species
Spa_g04531 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g31693 RPD1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e006573_P002 Zm00001e006573 Protein WHATS THIS FACTOR 1 homolog OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
Zm00001e014695_P001 Zm00001e014695 no description available(sp|q9zuz6|wtf9_arath : 128.0) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0008270 zinc ion binding IEP HCCA
MF GO:0043169 cation binding IEP HCCA
MF GO:0046872 metal ion binding IEP HCCA
MF GO:0046914 transition metal ion binding IEP HCCA
InterPro domains Description Start Stop
IPR021099 PORR_domain 194 517
No external refs found!