1. Home
  2. Species
  3. Ginkgo biloba
  4. Sequence
  5. Gb_04448

Gb_04448


Description : pectin acetylesterase


Gene families : OG0000637 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000637_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Gb_04448

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00045p00148030 evm_27.TU.AmTr_v1... Cell wall.pectin.modification and degradation.pectin... 0.02 OrthoFinder output from all 47 species
AT3G05910 No alias Pectinacetylesterase family protein 0.03 OrthoFinder output from all 47 species
Adi_g000516 No alias pectin acetylesterase *(PAE) & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g060254 No alias pectin acetylesterase *(PAE) & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g02921 No alias pectin acetylesterase *(PAE) & original description: none 0.05 OrthoFinder output from all 47 species
Ehy_g00973 No alias pectin acetylesterase *(PAE) & original description: none 0.04 OrthoFinder output from all 47 species
GSVIVT01017717001 No alias Cell wall.pectin.modification and degradation.pectin... 0.03 OrthoFinder output from all 47 species
GSVIVT01034178001 No alias Cell wall.pectin.modification and degradation.pectin... 0.05 OrthoFinder output from all 47 species
LOC_Os01g66830.1 LOC_Os01g66830 pectin acetylesterase 0.02 OrthoFinder output from all 47 species
LOC_Os01g74330.1 LOC_Os01g74330 pectin acetylesterase 0.02 OrthoFinder output from all 47 species
LOC_Os07g44070.1 LOC_Os07g44070 pectin acetylesterase 0.06 OrthoFinder output from all 47 species
LOC_Os10g40290.1 LOC_Os10g40290 Pectin acetylesterase 9 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
MA_10306500g0010 No alias Pectin acetylesterase 8 OS=Arabidopsis thaliana... 0.01 OrthoFinder output from all 47 species
Nbi_g12003 No alias pectin acetylesterase *(PAE) & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g29610 No alias pectin acetylesterase *(PAE) & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g03265 No alias pectin acetylesterase *(PAE) & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g39303 No alias pectin acetylesterase *(PAE) & original description: none 0.08 OrthoFinder output from all 47 species
Smo271371 No alias Cell wall.pectin.modification and degradation.pectin... 0.03 OrthoFinder output from all 47 species
Solyc08g005800.4.1 Solyc08g005800 pectin acetylesterase 0.02 OrthoFinder output from all 47 species
Solyc10g086480.3.1 Solyc10g086480 pectin acetylesterase 0.05 OrthoFinder output from all 47 species
Spa_g11809 No alias pectin acetylesterase *(PAE) & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e017068_P001 Zm00001e017068 pectin acetylesterase 0.02 OrthoFinder output from all 47 species
Zm00001e017534_P003 Zm00001e017534 Pectin acetylesterase 3 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Zm00001e018491_P002 Zm00001e018491 pectin acetylesterase 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0016787 hydrolase activity IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
BP GO:0000413 protein peptidyl-prolyl isomerization IEP HCCA
MF GO:0003755 peptidyl-prolyl cis-trans isomerase activity IEP HCCA
BP GO:0006486 protein glycosylation IEP HCCA
MF GO:0008417 fucosyltransferase activity IEP HCCA
MF GO:0016409 palmitoyltransferase activity IEP HCCA
MF GO:0016740 transferase activity IEP HCCA
MF GO:0016757 glycosyltransferase activity IEP HCCA
MF GO:0016859 cis-trans isomerase activity IEP HCCA
BP GO:0018193 peptidyl-amino acid modification IEP HCCA
BP GO:0018208 peptidyl-proline modification IEP HCCA
BP GO:0043413 macromolecule glycosylation IEP HCCA
BP GO:0070085 glycosylation IEP HCCA
InterPro domains Description Start Stop
IPR004963 PAE/NOTUM 63 408
No external refs found!