Aliases : OTP84
Description : Pentatricopeptide repeat-containing protein DOT4, chloroplastic OS=Arabidopsis thaliana (sp|q9sn39|pp320_arath : 707.0)
Gene families : OG0000000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
AMTR_s00003p00032470 | No alias | Pentatricopeptide repeat-containing protein At1g25360... | 0.03 | OrthoFinder output from all 47 species | |
AMTR_s00003p00222920 | No alias | Putative pentatricopeptide repeat-containing protein... | 0.03 | OrthoFinder output from all 47 species | |
AMTR_s00031p00067070 | emb1899, EMB175, EMB166 | Pentatricopeptide repeat-containing protein At5g03800... | 0.02 | OrthoFinder output from all 47 species | |
AMTR_s00038p00071780 | evm_27.TU.AmTr_v1... | Pentatricopeptide repeat-containing protein At3g26540... | 0.02 | OrthoFinder output from all 47 species | |
AMTR_s00049p00220350 | OTP85,... | Pentatricopeptide repeat-containing protein At2g02980,... | 0.03 | OrthoFinder output from all 47 species | |
AMTR_s00065p00031420 | evm_27.TU.AmTr_v1... | Pentatricopeptide repeat-containing protein At2g33680... | 0.03 | OrthoFinder output from all 47 species | |
AT4G02750 | No alias | Tetratricopeptide repeat (TPR)-like superfamily protein | 0.04 | OrthoFinder output from all 47 species | |
Adi_g005609 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Adi_g005728 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Adi_g039747 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Adi_g096278 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
Adi_g110083 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
Aop_g36436 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
GSVIVT01016874001 | OTP82 | Pentatricopeptide repeat-containing protein At1g08070,... | 0.03 | OrthoFinder output from all 47 species | |
GSVIVT01017763001 | No alias | Pentatricopeptide repeat-containing protein At4g15720... | 0.03 | OrthoFinder output from all 47 species | |
GSVIVT01027504001 | No alias | Pentatricopeptide repeat-containing protein At2g22070... | 0.03 | OrthoFinder output from all 47 species | |
Gb_00206 | CRR22 | Pentatricopeptide repeat-containing protein At1g11290,... | 0.04 | OrthoFinder output from all 47 species | |
Gb_00930 | CRR22 | Pentatricopeptide repeat-containing protein At2g22070... | 0.04 | OrthoFinder output from all 47 species | |
Gb_03221 | No alias | Pentatricopeptide repeat-containing protein At4g02750... | 0.05 | OrthoFinder output from all 47 species | |
Gb_09382 | No alias | Putative pentatricopeptide repeat-containing protein... | 0.03 | OrthoFinder output from all 47 species | |
Gb_16102 | CRR22 | Pentatricopeptide repeat-containing protein At2g13600... | 0.04 | OrthoFinder output from all 47 species | |
Gb_17295 | OTP84 | Pentatricopeptide repeat-containing protein At3g57430,... | 0.03 | OrthoFinder output from all 47 species | |
Gb_17382 | OTP86 | Pentatricopeptide repeat-containing protein At3g63370,... | 0.03 | OrthoFinder output from all 47 species | |
Gb_18908 | CRR22 | Pentatricopeptide repeat-containing protein At1g11290,... | 0.03 | OrthoFinder output from all 47 species | |
Gb_37254 | OTP84 | Pentatricopeptide repeat-containing protein At3g63370,... | 0.03 | OrthoFinder output from all 47 species | |
Gb_41801 | REME1 | Pentatricopeptide repeat-containing protein At3g24000,... | 0.03 | OrthoFinder output from all 47 species | |
LOC_Os04g09530.1 | LOC_Os04g09530 | RNA editing factor (BLX) | 0.02 | OrthoFinder output from all 47 species | |
LOC_Os09g24680.1 | LOC_Os09g24680 | Pentatricopeptide repeat-containing protein At1g74600,... | 0.03 | OrthoFinder output from all 47 species | |
MA_101084g0010 | CRR22 | Pentatricopeptide repeat-containing protein At1g11290,... | 0.03 | OrthoFinder output from all 47 species | |
MA_10214098g0010 | No alias | Pentatricopeptide repeat-containing protein At4g33170... | 0.05 | OrthoFinder output from all 47 species | |
MA_102449g0020 | No alias | Pentatricopeptide repeat-containing protein At4g33170... | 0.03 | OrthoFinder output from all 47 species | |
MA_10257685g0010 | No alias | Pentatricopeptide repeat-containing protein DOT4,... | 0.06 | OrthoFinder output from all 47 species | |
MA_10277392g0010 | CRR22 | Pentatricopeptide repeat-containing protein DOT4,... | 0.04 | OrthoFinder output from all 47 species | |
MA_10311934g0010 | MEF22 | Pentatricopeptide repeat-containing protein At1g15510,... | 0.03 | OrthoFinder output from all 47 species | |
MA_10427342g0010 | No alias | Pentatricopeptide repeat-containing protein At3g09040,... | 0.06 | OrthoFinder output from all 47 species | |
MA_10429371g0010 | OTP84 | Pentatricopeptide repeat-containing protein At3g57430,... | 0.03 | OrthoFinder output from all 47 species | |
MA_10429837g0010 | CRR22 | Pentatricopeptide repeat-containing protein At1g11290,... | 0.04 | OrthoFinder output from all 47 species | |
MA_10431508g0010 | No alias | Pentatricopeptide repeat-containing protein At4g02750... | 0.04 | OrthoFinder output from all 47 species | |
MA_10432670g0010 | No alias | Putative pentatricopeptide repeat-containing protein... | 0.04 | OrthoFinder output from all 47 species | |
MA_10435641g0010 | No alias | Pentatricopeptide repeat-containing protein At4g02750... | 0.03 | OrthoFinder output from all 47 species | |
MA_10436764g0010 | No alias | Pentatricopeptide repeat-containing protein At4g13650... | 0.05 | OrthoFinder output from all 47 species | |
MA_104937g0010 | REME1 | Pentatricopeptide repeat-containing protein At2g03880,... | 0.06 | OrthoFinder output from all 47 species | |
MA_107356g0010 | CRR2 | Putative pentatricopeptide repeat-containing protein... | 0.06 | OrthoFinder output from all 47 species | |
MA_1109g0010 | No alias | Pentatricopeptide repeat-containing protein At4g33170... | 0.03 | OrthoFinder output from all 47 species | |
MA_111990g0010 | REME1 | Pentatricopeptide repeat-containing protein At2g13600... | 0.05 | OrthoFinder output from all 47 species | |
MA_112066g0010 | No alias | Pentatricopeptide repeat-containing protein At4g13650... | 0.05 | OrthoFinder output from all 47 species | |
MA_114565g0020 | OTP84 | Pentatricopeptide repeat-containing protein At5g16860... | 0.04 | OrthoFinder output from all 47 species | |
MA_114722g0010 | CRR22 | Pentatricopeptide repeat-containing protein At1g11290,... | 0.08 | OrthoFinder output from all 47 species | |
MA_11517g0010 | No alias | Pentatricopeptide repeat-containing protein At4g02750... | 0.05 | OrthoFinder output from all 47 species | |
MA_11765g0010 | CRR22 | Pentatricopeptide repeat-containing protein At1g11290,... | 0.05 | OrthoFinder output from all 47 species | |
MA_118886g0010 | CRR22 | Pentatricopeptide repeat-containing protein At1g20230... | 0.03 | OrthoFinder output from all 47 species | |
MA_119635g0010 | No alias | Putative pentatricopeptide repeat-containing protein... | 0.04 | OrthoFinder output from all 47 species | |
MA_122546g0010 | No alias | Putative pentatricopeptide repeat-containing protein... | 0.02 | OrthoFinder output from all 47 species | |
MA_122606g0010 | No alias | Pentatricopeptide repeat-containing protein At4g02750... | 0.04 | OrthoFinder output from all 47 species | |
MA_122899g0010 | OTP84 | Pentatricopeptide repeat-containing protein At3g57430,... | 0.05 | OrthoFinder output from all 47 species | |
MA_124907g0010 | CRR22 | Pentatricopeptide repeat-containing protein At2g13600... | 0.03 | OrthoFinder output from all 47 species | |
MA_13057g0010 | No alias | Pentatricopeptide repeat-containing protein At4g33170... | 0.05 | OrthoFinder output from all 47 species | |
MA_130735g0010 | No alias | Pentatricopeptide repeat-containing protein At4g13650... | 0.04 | OrthoFinder output from all 47 species | |
MA_136188g0010 | CRR22 | Pentatricopeptide repeat-containing protein At1g11290,... | 0.1 | OrthoFinder output from all 47 species | |
MA_138190g0010 | CRR22 | Pentatricopeptide repeat-containing protein At1g11290,... | 0.03 | OrthoFinder output from all 47 species | |
MA_141034g0010 | No alias | Pentatricopeptide repeat-containing protein At4g33170... | 0.06 | OrthoFinder output from all 47 species | |
MA_14659g0010 | OTP84 | Pentatricopeptide repeat-containing protein At4g02750... | 0.06 | OrthoFinder output from all 47 species | |
MA_14938g0010 | CRR22 | Pentatricopeptide repeat-containing protein At1g11290,... | 0.03 | OrthoFinder output from all 47 species | |
MA_16226g0010 | OTP86 | Pentatricopeptide repeat-containing protein At3g63370,... | 0.03 | OrthoFinder output from all 47 species | |
MA_178429g0010 | No alias | Pentatricopeptide repeat-containing protein At4g02750... | 0.03 | OrthoFinder output from all 47 species | |
MA_179801g0020 | EMB2261 | Pentatricopeptide repeat-containing protein At4g02750... | 0.03 | OrthoFinder output from all 47 species | |
MA_184104g0010 | CRR22 | Pentatricopeptide repeat-containing protein At2g22070... | 0.03 | OrthoFinder output from all 47 species | |
MA_205762g0010 | No alias | Pentatricopeptide repeat-containing protein At4g02750... | 0.06 | OrthoFinder output from all 47 species | |
MA_20585g0020 | No alias | Pentatricopeptide repeat-containing protein At4g02750... | 0.05 | OrthoFinder output from all 47 species | |
MA_20746g0010 | CRR22 | Pentatricopeptide repeat-containing protein At1g11290,... | 0.05 | OrthoFinder output from all 47 species | |
MA_20899g0020 | OTP84 | Pentatricopeptide repeat-containing protein At3g57430,... | 0.05 | OrthoFinder output from all 47 species | |
MA_22485g0010 | CRR2 | Pentatricopeptide repeat-containing protein At3g46790,... | 0.02 | OrthoFinder output from all 47 species | |
MA_24849g0010 | CRR22 | Pentatricopeptide repeat-containing protein At4g02750... | 0.03 | OrthoFinder output from all 47 species | |
MA_25584g0010 | DOT4 | Pentatricopeptide repeat-containing protein DOT4,... | 0.04 | OrthoFinder output from all 47 species | |
MA_27147g0010 | EMB2261 | Pentatricopeptide repeat-containing protein At3g49170,... | 0.06 | OrthoFinder output from all 47 species | |
MA_271639g0010 | No alias | Pentatricopeptide repeat-containing protein At4g02750... | 0.03 | OrthoFinder output from all 47 species | |
MA_28607g0010 | No alias | Pentatricopeptide repeat-containing protein At4g02750... | 0.04 | OrthoFinder output from all 47 species | |
MA_305950g0010 | EMB2261 | Pentatricopeptide repeat-containing protein At4g02750... | 0.04 | OrthoFinder output from all 47 species | |
MA_30632g0020 | CRR22 | Pentatricopeptide repeat-containing protein At4g02750... | 0.03 | OrthoFinder output from all 47 species | |
MA_3449g0010 | CRR22 | Pentatricopeptide repeat-containing protein At2g22070... | 0.06 | OrthoFinder output from all 47 species | |
MA_35442g0010 | No alias | RNA editing factor (SLO2) | 0.04 | OrthoFinder output from all 47 species | |
MA_36643g0010 | CRR22 | Pentatricopeptide repeat-containing protein At3g03580... | 0.06 | OrthoFinder output from all 47 species | |
MA_36655g0010 | No alias | Pentatricopeptide repeat-containing protein At4g39530... | 0.04 | OrthoFinder output from all 47 species | |
MA_38266g0010 | CRR22 | RNA editing factor (MEF19). RNA editing factor (OTP82) | 0.05 | OrthoFinder output from all 47 species | |
MA_442926g0010 | No alias | Pentatricopeptide repeat-containing protein At4g13650... | 0.04 | OrthoFinder output from all 47 species | |
MA_4503g0010 | No alias | Pentatricopeptide repeat-containing protein At2g27610... | 0.04 | OrthoFinder output from all 47 species | |
MA_483636g0010 | No alias | Pentatricopeptide repeat-containing protein At4g13650... | 0.03 | OrthoFinder output from all 47 species | |
MA_49292g0010 | No alias | Pentatricopeptide repeat-containing protein At4g02750... | 0.08 | OrthoFinder output from all 47 species | |
MA_519985g0010 | OTP84 | Pentatricopeptide repeat-containing protein At3g57430,... | 0.07 | OrthoFinder output from all 47 species | |
MA_53781g0010 | No alias | Pentatricopeptide repeat-containing protein At1g11290,... | 0.03 | OrthoFinder output from all 47 species | |
MA_5481g0010 | CRR22 | Pentatricopeptide repeat-containing protein DOT4,... | 0.03 | OrthoFinder output from all 47 species | |
MA_55967g0010 | No alias | Pentatricopeptide repeat-containing protein At4g02750... | 0.03 | OrthoFinder output from all 47 species | |
MA_59148g0010 | CRR22 | RNA editing factor (MEF11) | 0.05 | OrthoFinder output from all 47 species | |
MA_61422g0020 | No alias | Pentatricopeptide repeat-containing protein At4g13650... | 0.06 | OrthoFinder output from all 47 species | |
MA_62181g0010 | VAC1, ECB2, ATECB2 | Pentatricopeptide repeat-containing protein DOT4,... | 0.03 | OrthoFinder output from all 47 species | |
MA_632994g0010 | No alias | Pentatricopeptide repeat-containing protein At2g33680... | 0.03 | OrthoFinder output from all 47 species | |
MA_658463g0010 | OTP84 | Pentatricopeptide repeat-containing protein At4g02750... | 0.04 | OrthoFinder output from all 47 species | |
MA_66417g0010 | No alias | Pentatricopeptide repeat-containing protein At2g22070... | 0.03 | OrthoFinder output from all 47 species | |
MA_683665g0010 | No alias | Pentatricopeptide repeat-containing protein At4g13650... | 0.03 | OrthoFinder output from all 47 species | |
MA_68580g0010 | No alias | Pentatricopeptide repeat-containing protein At4g02750... | 0.04 | OrthoFinder output from all 47 species | |
MA_68707g0010 | No alias | RNA editing factor (MEF1) | 0.04 | OrthoFinder output from all 47 species | |
MA_75255g0010 | No alias | Pentatricopeptide repeat-containing protein At4g33170... | 0.04 | OrthoFinder output from all 47 species | |
MA_7691g0010 | CRR22 | Pentatricopeptide repeat-containing protein At2g22070... | 0.03 | OrthoFinder output from all 47 species | |
MA_77675g0010 | No alias | Pentatricopeptide repeat-containing protein At4g13650... | 0.03 | OrthoFinder output from all 47 species | |
MA_778985g0010 | No alias | Pentatricopeptide repeat-containing protein At2g27610... | 0.03 | OrthoFinder output from all 47 species | |
MA_805687g0010 | No alias | Pentatricopeptide repeat-containing protein At4g33170... | 0.05 | OrthoFinder output from all 47 species | |
MA_812716g0010 | EMB2758 | Pentatricopeptide repeat-containing protein At2g22070... | 0.04 | OrthoFinder output from all 47 species | |
MA_8491g0010 | CRR2 | Pentatricopeptide repeat-containing protein At4g02750... | 0.04 | OrthoFinder output from all 47 species | |
MA_858608g0010 | CRR22 | Pentatricopeptide repeat-containing protein At4g02750... | 0.07 | OrthoFinder output from all 47 species | |
MA_90090g0010 | No alias | Pentatricopeptide repeat-containing protein At4g39530... | 0.08 | OrthoFinder output from all 47 species | |
MA_905781g0010 | No alias | Pentatricopeptide repeat-containing protein At1g20230... | 0.05 | OrthoFinder output from all 47 species | |
MA_958908g0010 | OTP84 | Pentatricopeptide repeat-containing protein At2g22070... | 0.03 | OrthoFinder output from all 47 species | |
MA_97789g0010 | CRR22 | Pentatricopeptide repeat-containing protein At3g26540... | 0.04 | OrthoFinder output from all 47 species | |
Smo105033 | No alias | Pentatricopeptide repeat-containing protein At3g09040,... | 0.02 | OrthoFinder output from all 47 species | |
Smo127010 | OTP81 | Pentatricopeptide repeat-containing protein At4g02750... | 0.02 | OrthoFinder output from all 47 species | |
Smo131642 | No alias | Pentatricopeptide repeat-containing protein At4g13650... | 0.04 | OrthoFinder output from all 47 species | |
Smo135822 | CRR2 | Pentatricopeptide repeat-containing protein At3g09040,... | 0.02 | OrthoFinder output from all 47 species | |
Smo174459 | No alias | Pentatricopeptide repeat-containing protein At2g13600... | 0.02 | OrthoFinder output from all 47 species | |
Smo334 | No alias | Pentatricopeptide repeat-containing protein At4g13650... | 0.02 | OrthoFinder output from all 47 species | |
Smo61257 | No alias | Pentatricopeptide repeat-containing protein At3g53360,... | 0.02 | OrthoFinder output from all 47 species | |
Smo82268 | No alias | Pentatricopeptide repeat-containing protein At3g03580... | 0.02 | OrthoFinder output from all 47 species | |
Smo88697 | CRR22 | Pentatricopeptide repeat-containing protein At1g11290,... | 0.02 | OrthoFinder output from all 47 species | |
Smo90222 | No alias | Pentatricopeptide repeat-containing protein At4g02750... | 0.02 | OrthoFinder output from all 47 species | |
Smo96227 | No alias | Pentatricopeptide repeat-containing protein At4g02750... | 0.03 | OrthoFinder output from all 47 species | |
Solyc01g090510.2.1 | Solyc01g090510 | Putative pentatricopeptide repeat-containing protein... | 0.04 | OrthoFinder output from all 47 species | |
Solyc01g110010.3.1 | Solyc01g110010 | Pentatricopeptide repeat-containing protein At1g74600,... | 0.04 | OrthoFinder output from all 47 species | |
Solyc03g098420.3.1 | Solyc03g098420 | Putative pentatricopeptide repeat-containing protein... | 0.02 | OrthoFinder output from all 47 species | |
Solyc03g119120.3.1 | Solyc03g119120 | Pentatricopeptide repeat-containing protein At4g02750... | 0.04 | OrthoFinder output from all 47 species | |
Solyc05g009400.3.1 | Solyc05g009400 | Pentatricopeptide repeat-containing protein At3g29230... | 0.04 | OrthoFinder output from all 47 species | |
Solyc07g006990.3.1 | Solyc07g006990 | Putative pentatricopeptide repeat-containing protein... | 0.03 | OrthoFinder output from all 47 species | |
Solyc09g090220.3.1 | Solyc09g090220 | Putative pentatricopeptide repeat-containing protein... | 0.03 | OrthoFinder output from all 47 species | |
Solyc12g099620.1.1 | Solyc12g099620 | Pentatricopeptide repeat-containing protein At4g32430,... | 0.04 | OrthoFinder output from all 47 species | |
Zm00001e001007_P001 | Zm00001e001007 | Putative pentatricopeptide repeat-containing protein... | 0.03 | OrthoFinder output from all 47 species | |
Zm00001e001038_P001 | CRR2, Zm00001e001038 | Pentatricopeptide repeat-containing protein At1g08070,... | 0.03 | OrthoFinder output from all 47 species | |
Zm00001e003284_P001 | Zm00001e003284 | Putative pentatricopeptide repeat-containing protein... | 0.05 | OrthoFinder output from all 47 species | |
Zm00001e010837_P001 | LPA66, Zm00001e010837 | Pentatricopeptide repeat-containing protein At5g48910... | 0.03 | OrthoFinder output from all 47 species | |
Zm00001e021380_P001 | Zm00001e021380 | Pentatricopeptide repeat-containing protein At3g12770... | 0.04 | OrthoFinder output from all 47 species | |
Zm00001e030887_P001 | Zm00001e030887 | Putative pentatricopeptide repeat-containing protein... | 0.03 | OrthoFinder output from all 47 species | |
Zm00001e035419_P001 | Zm00001e035419 | Pentatricopeptide repeat-containing protein At1g25360... | 0.03 | OrthoFinder output from all 47 species | |
Zm00001e036537_P001 | Zm00001e036537 | Putative pentatricopeptide repeat-containing protein... | 0.03 | OrthoFinder output from all 47 species | |
Zm00001e037600_P001 | Zm00001e037600 | Putative pentatricopeptide repeat-containing protein... | 0.03 | OrthoFinder output from all 47 species | |
Zm00001e039026_P001 | OTP82, Zm00001e039026 | Pentatricopeptide repeat-containing protein At5g48910... | 0.02 | OrthoFinder output from all 47 species |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0008270 | zinc ion binding | IEA | Interproscan |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
No Predicted GO terms available for this sequence |
InterPro domains | Description | Start | Stop |
---|---|---|---|
IPR002885 | Pentatricopeptide_repeat | 452 | 500 |
IPR002885 | Pentatricopeptide_repeat | 351 | 399 |
IPR002885 | Pentatricopeptide_repeat | 554 | 600 |
IPR002885 | Pentatricopeptide_repeat | 149 | 196 |
IPR002885 | Pentatricopeptide_repeat | 251 | 299 |
IPR032867 | DYW_dom | 727 | 851 |
IPR002885 | Pentatricopeptide_repeat | 629 | 652 |
IPR002885 | Pentatricopeptide_repeat | 225 | 250 |
No external refs found! |