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  5. Gb_04153

Gb_04153


Description : Protein STRICTOSIDINE SYNTHASE-LIKE 5 OS=Arabidopsis thaliana (sp|q9caz7|ssl5_arath : 90.9)


Gene families : OG0001226 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001226_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Gb_04153
Cluster HCCA: Cluster_115

Target Alias Description ECC score Gene Family Method Actions
AT3G51440 No alias Calcium-dependent phosphotriesterase superfamily protein 0.02 OrthoFinder output from all 47 species
Aop_g69738 SSL5, YLS2 EC_4.3 carbon-nitrogen lyase & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0076.g037860 SSL5, YLS2 EC_4.3 carbon-nitrogen lyase & original description: CDS=59-1171 0.04 OrthoFinder output from all 47 species
Ceric.35G037600.1 Ceric.35G037600 not classified & original description: pacid=50581399... 0.03 OrthoFinder output from all 47 species
Ceric.35G037700.1 SSL5, YLS2,... EC_4.3 carbon-nitrogen lyase & original description:... 0.04 OrthoFinder output from all 47 species
GSVIVT01003823001 SSL5, YLS2 Protein STRICTOSIDINE SYNTHASE-LIKE 5 OS=Arabidopsis thaliana 0.01 OrthoFinder output from all 47 species
GSVIVT01003826001 SSL5, YLS2 Protein STRICTOSIDINE SYNTHASE-LIKE 5 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
Gb_08945 ATSSL4, SSL4 Protein STRICTOSIDINE SYNTHASE-LIKE 4 OS=Arabidopsis... 0.01 OrthoFinder output from all 47 species
Ore_g32752 SSL5, YLS2 EC_4.3 carbon-nitrogen lyase & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g00537 No alias EC_4.3 carbon-nitrogen lyase & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g38046 No alias EC_4.3 carbon-nitrogen lyase & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0003006 developmental process involved in reproduction IEP HCCA
MF GO:0004618 phosphoglycerate kinase activity IEP HCCA
BP GO:0006090 pyruvate metabolic process IEP HCCA
BP GO:0006096 glycolytic process IEP HCCA
BP GO:0006165 nucleoside diphosphate phosphorylation IEP HCCA
BP GO:0006757 ATP generation from ADP IEP HCCA
BP GO:0007275 multicellular organism development IEP HCCA
BP GO:0009132 nucleoside diphosphate metabolic process IEP HCCA
BP GO:0009135 purine nucleoside diphosphate metabolic process IEP HCCA
BP GO:0009179 purine ribonucleoside diphosphate metabolic process IEP HCCA
BP GO:0009185 ribonucleoside diphosphate metabolic process IEP HCCA
BP GO:0009790 embryo development IEP HCCA
BP GO:0009793 embryo development ending in seed dormancy IEP HCCA
BP GO:0016052 carbohydrate catabolic process IEP HCCA
MF GO:0016774 phosphotransferase activity, carboxyl group as acceptor IEP HCCA
MF GO:0019842 vitamin binding IEP HCCA
BP GO:0022414 reproductive process IEP HCCA
MF GO:0030976 thiamine pyrophosphate binding IEP HCCA
BP GO:0032501 multicellular organismal process IEP HCCA
BP GO:0032502 developmental process IEP HCCA
BP GO:0046031 ADP metabolic process IEP HCCA
BP GO:0046939 nucleotide phosphorylation IEP HCCA
BP GO:0048856 anatomical structure development IEP HCCA
MF GO:0050997 quaternary ammonium group binding IEP HCCA
MF GO:1901681 sulfur compound binding IEP HCCA

No InterPro domains available for this sequence

No external refs found!