Gb_04109 (RCA)

Aliases : RCA

Description : ATP-dependent activase involved in RuBisCo regulation

Gene families : OG0001509 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001509_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Gb_04109

Target	Alias	Description	ECC score	Gene Family Method
Adi_g060599	RCA	ATP-dependent activase involved in RuBisCo regulation &...	0.03	OrthoFinder output from all 47 species
Adi_g079810	RCA	ATP-dependent activase involved in RuBisCo regulation &...	0.03	OrthoFinder output from all 47 species
Ala_g04126	RCA	ATP-dependent activase involved in RuBisCo regulation &...	0.03	OrthoFinder output from all 47 species
Ala_g06980	RCA	ATP-dependent activase involved in RuBisCo regulation &...	0.04	OrthoFinder output from all 47 species
Als_g03717	RCA	ATP-dependent activase involved in RuBisCo regulation &...	0.03	OrthoFinder output from all 47 species
Als_g25347	RCA	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Als_g63065	RCA	ATP-dependent activase involved in RuBisCo regulation &...	0.04	OrthoFinder output from all 47 species
Aob_g25713	RCA	ATP-dependent activase involved in RuBisCo regulation &...	0.03	OrthoFinder output from all 47 species
Aop_g12629	RCA	ATP-dependent activase involved in RuBisCo regulation &...	0.03	OrthoFinder output from all 47 species
Aspi01Gene46212.t1	RCA, Aspi01Gene46212	ATP-dependent activase involved in RuBisCo regulation &...	0.03	OrthoFinder output from all 47 species
Cba_g02574	RCA	ATP-dependent activase involved in RuBisCo regulation &...	0.04	OrthoFinder output from all 47 species
Cba_g15232	RCA	ATP-dependent activase involved in RuBisCo regulation &...	0.02	OrthoFinder output from all 47 species
Ceric.12G094300.1	RCA, Ceric.12G094300	ATP-dependent activase involved in RuBisCo regulation &...	0.03	OrthoFinder output from all 47 species
Ceric.12G094500.1	RCA, Ceric.12G094500	ATP-dependent activase involved in RuBisCo regulation &...	0.04	OrthoFinder output from all 47 species
Ceric.12G094700.1	RCA, Ceric.12G094700	ATP-dependent activase involved in RuBisCo regulation &...	0.03	OrthoFinder output from all 47 species
Ceric.12G094800.1	RCA, Ceric.12G094800	ATP-dependent activase involved in RuBisCo regulation &...	0.03	OrthoFinder output from all 47 species
Ceric.28G002100.1	RCA, Ceric.28G002100	ATP-dependent activase involved in RuBisCo regulation &...	0.03	OrthoFinder output from all 47 species
Dac_g13179	RCA	ATP-dependent activase involved in RuBisCo regulation &...	0.04	OrthoFinder output from all 47 species
Dcu_g18051	RCA	ATP-dependent activase involved in RuBisCo regulation &...	0.03	OrthoFinder output from all 47 species
Dcu_g42045	RCA	ATP-dependent activase involved in RuBisCo regulation &...	0.03	OrthoFinder output from all 47 species
Len_g17744	RCA	ATP-dependent activase involved in RuBisCo regulation &...	0.02	OrthoFinder output from all 47 species
Len_g24593	RCA	ATP-dependent activase involved in RuBisCo regulation &...	0.02	OrthoFinder output from all 47 species
Lfl_g05580	RCA	ATP-dependent activase involved in RuBisCo regulation &...	0.04	OrthoFinder output from all 47 species
Lfl_g10261	RCA	ATP-dependent activase involved in RuBisCo regulation &...	0.02	OrthoFinder output from all 47 species
Nbi_g09928	RCA	ATP-dependent activase involved in RuBisCo regulation &...	0.04	OrthoFinder output from all 47 species
Ore_g04065	RCA	ATP-dependent activase involved in RuBisCo regulation &...	0.04	OrthoFinder output from all 47 species
Ore_g20242	RCA	ATP-dependent activase involved in RuBisCo regulation &...	0.03	OrthoFinder output from all 47 species
Ore_g35469	RCA	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Sam_g28274	No alias	ATP-dependent activase involved in RuBisCo regulation &...	0.03	OrthoFinder output from all 47 species
Sam_g28275	No alias	ATP-dependent activase involved in RuBisCo regulation &...	0.03	OrthoFinder output from all 47 species
Smo268623	RCA	Photosynthesis.calvin cycle.ribulose-1,5-bisphosphat...	0.02	OrthoFinder output from all 47 species
Spa_g29802	RCA	ATP-dependent activase involved in RuBisCo regulation &...	0.02	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005524	ATP binding	IEA	Interproscan
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0030554	adenyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032559	adenyl ribonucleotide binding	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0003824	catalytic activity	IEP	HCCA
MF	GO:0016491	oxidoreductase activity	IEP	HCCA
MF	GO:0016701	oxidoreductase activity, acting on single donors with incorporation of molecular oxygen	IEP	HCCA
MF	GO:0016702	oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen	IEP	HCCA
MF	GO:0016765	transferase activity, transferring alkyl or aryl (other than methyl) groups	IEP	HCCA
MF	GO:0051213	dioxygenase activity	IEP	HCCA
BP	GO:0055114	obsolete oxidation-reduction process	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR003959	ATPase_AAA_core	167	308

External Links

No external refs found!

Gb_04109 (RCA)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation