Gb_04106 (COI1)


Aliases : COI1

Description : component COI of jasmonic acid receptor complex


Gene families : OG0000211 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000211_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Gb_04106

Target Alias Description ECC score Gene Family Method Actions
Als_g28117 AFB2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene04139.t1 TIR1, Aspi01Gene04139 substrate adaptor of SCF E3 ubiquitin ligase *(TIR1/AFB)... 0.03 OrthoFinder output from all 47 species
Aspi01Gene06540.t1 AFB2, Aspi01Gene06540 substrate adaptor of SCF E3 ubiquitin ligase *(TIR1/AFB)... 0.03 OrthoFinder output from all 47 species
Ceric.11G069600.1 COI1, Ceric.11G069600 component *(COI) of jasmonic acid receptor complex &... 0.03 OrthoFinder output from all 47 species
Ceric.17G050600.1 COI1, Ceric.17G050600 component *(COI) of jasmonic acid receptor complex &... 0.04 OrthoFinder output from all 47 species
Ehy_g07920 TIR1 substrate adaptor of SCF E3 ubiquitin ligase *(TIR1/AFB)... 0.03 OrthoFinder output from all 47 species
LOC_Os01g63420.1 COI1, LOC_Os01g63420 component COI of jasmonic acid receptor complex 0.03 OrthoFinder output from all 47 species
Len_g22721 AFB2 substrate adaptor of SCF E3 ubiquitin ligase *(TIR1/AFB)... 0.03 OrthoFinder output from all 47 species
Lfl_g18913 COI1 component *(COI) of jasmonic acid receptor complex &... 0.02 OrthoFinder output from all 47 species
MA_263909g0010 COI1 Coronatine-insensitive protein homolog 1b OS=Oryza... 0.06 OrthoFinder output from all 47 species
Nbi_g04343 AFB2 substrate adaptor of SCF E3 ubiquitin ligase *(TIR1/AFB)... 0.04 OrthoFinder output from all 47 species
Pnu_g20970 COI1 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0032.g010765 AFB2 substrate adaptor of SCF E3 ubiquitin ligase *(TIR1/AFB)... 0.02 OrthoFinder output from all 47 species
Spa_g18052 COI1 component *(COI) of jasmonic acid receptor complex &... 0.03 OrthoFinder output from all 47 species
Spa_g28126 COI1 not classified & original description: none 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0004842 ubiquitin-protein transferase activity IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005515 protein binding IEP HCCA
BP GO:0016567 protein ubiquitination IEP HCCA
MF GO:0016740 transferase activity IEP HCCA
BP GO:0019538 protein metabolic process IEP HCCA
MF GO:0019787 ubiquitin-like protein transferase activity IEP HCCA
BP GO:0032446 protein modification by small protein conjugation IEP HCCA
BP GO:0036211 protein modification process IEP HCCA
BP GO:0043170 macromolecule metabolic process IEP HCCA
BP GO:0043412 macromolecule modification IEP HCCA
BP GO:0070647 protein modification by small protein conjugation or removal IEP HCCA
MF GO:0140096 catalytic activity, acting on a protein IEP HCCA
BP GO:1901564 organonitrogen compound metabolic process IEP HCCA
InterPro domains Description Start Stop
IPR041567 COI1_F-box 12 52
IPR041101 Transp_inhibit 71 117
No external refs found!