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  5. Gb_03723

Gb_03723


Description : regulatory protein (PATROL1) of CSC trafficking


Gene families : OG0000883 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000883_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Gb_03723

Target Alias Description ECC score Gene Family Method Actions
AT2G25800 No alias Protein of unknown function (DUF810) 0.02 OrthoFinder output from all 47 species
Azfi_s0099.g044165 No alias not classified & original description: CDS=394-3840 0.03 OrthoFinder output from all 47 species
Ore_g18251 No alias regulatory protein *(PATROL1) involved in cellulose... 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0076.g017550 No alias not classified & original description: CDS=962-3898 0.03 OrthoFinder output from all 47 species
Smo92955 No alias Protein unc-13 homolog OS=Arabidopsis thaliana 0.04 OrthoFinder output from all 47 species
Solyc08g080520.4.1 Solyc08g080520 Protein unc-13 homolog OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEP HCCA
MF GO:0004540 ribonuclease activity IEP HCCA
MF GO:0008324 monoatomic cation transmembrane transporter activity IEP HCCA
MF GO:0015078 proton transmembrane transporter activity IEP HCCA
MF GO:0022890 inorganic cation transmembrane transporter activity IEP HCCA
CC GO:0033177 proton-transporting two-sector ATPase complex, proton-transporting domain IEP HCCA
CC GO:0033179 proton-transporting V-type ATPase, V0 domain IEP HCCA
BP GO:0034220 monoatomic ion transmembrane transport IEP HCCA
BP GO:0098655 monoatomic cation transmembrane transport IEP HCCA
BP GO:0098660 inorganic ion transmembrane transport IEP HCCA
BP GO:0098662 inorganic cation transmembrane transport IEP HCCA
CC GO:0098796 membrane protein complex IEP HCCA
BP GO:1902600 proton transmembrane transport IEP HCCA

No InterPro domains available for this sequence

No external refs found!