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  5. Gb_03481

Gb_03481 (CRR22)


Aliases : CRR22

Description : Pentatricopeptide repeat-containing protein At2g22070 OS=Arabidopsis thaliana (sp|q9shz8|pp168_arath : 637.0)


Gene families : OG0015202 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0015202_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Gb_03481
Cluster HCCA: Cluster_157

Target Alias Description ECC score Gene Family Method Actions
Gb_28586 VAC1, ECB2, ATECB2 Pentatricopeptide repeat-containing protein At2g13600... 0.03 OrthoFinder output from all 47 species
LOC_Os03g49464.2 LOC_Os03g49464 Pentatricopeptide repeat-containing protein At2g13600... 0.03 OrthoFinder output from all 47 species
MA_28762g0010 No alias Pentatricopeptide repeat-containing protein At2g13600... 0.03 OrthoFinder output from all 47 species
Zm00001e012231_P001 Zm00001e012231 Pentatricopeptide repeat-containing protein At2g13600... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0008270 zinc ion binding IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 606 629
IPR002885 Pentatricopeptide_repeat 672 699
IPR002885 Pentatricopeptide_repeat 241 264
IPR002885 Pentatricopeptide_repeat 429 477
IPR002885 Pentatricopeptide_repeat 165 213
IPR002885 Pentatricopeptide_repeat 531 579
IPR002885 Pentatricopeptide_repeat 297 345
IPR032867 DYW_dom 704 828
IPR002885 Pentatricopeptide_repeat 265 295
IPR002885 Pentatricopeptide_repeat 398 426
No external refs found!