Gb_03340 (MBD05, MBD5, ATMBD5)

Aliases : MBD05, MBD5, ATMBD5

Description : methylation reader (MBD5-6)

Gene families : OG0000559 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000559_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Gb_03340

Target	Alias	Description	ECC score	Gene Family Method
Aev_g13387	MBD05, MBD5, ATMBD5	methylation reader *(MBD5-6) & original description: none	0.04	OrthoFinder output from all 47 species
Azfi_s0028.g024028	ATMBD6, MBD6	methylation reader *(MBD5-6) & original description: CDS=264-1880	0.03	OrthoFinder output from all 47 species
Nbi_g22182	ATMBD6, MBD6	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Sacu_v1.1_s0058.g014899	No alias	methylation reader *(MBD5-6) & original description: CDS=290-1816	0.02	OrthoFinder output from all 47 species
Solyc03g025970.3.1	MBD13, Solyc03g025970	no hits & (original description: none)	0.05	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0018995	host cellular component	None	Extended
CC	GO:0033643	host cell part	None	Extended
CC	GO:0033646	host intracellular part	None	Extended
CC	GO:0033647	host intracellular organelle	None	Extended
CC	GO:0033648	host intracellular membrane-bounded organelle	None	Extended
CC	GO:0042025	host cell nucleus	IEA	Interproscan
MF	GO:0097159	organic cyclic compound binding	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
MF	GO:0004672	protein kinase activity	IEP	HCCA
BP	GO:0006468	protein phosphorylation	IEP	HCCA
BP	GO:0009719	response to endogenous stimulus	IEP	HCCA
BP	GO:0009725	response to hormone	IEP	HCCA
BP	GO:0010033	response to organic substance	IEP	HCCA
MF	GO:0016740	transferase activity	IEP	HCCA
MF	GO:0016758	hexosyltransferase activity	IEP	HCCA
BP	GO:0030258	lipid modification	IEP	HCCA
BP	GO:0030259	lipid glycosylation	IEP	HCCA
BP	GO:0042221	response to chemical	IEP	HCCA
BP	GO:0070085	glycosylation	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR001739	Methyl_CpG_DNA-bd	107	161

External Links

No external refs found!