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  5. Gb_03315

Gb_03315


Description : PAM68 protein involved in PS-II assembly


Gene families : OG0005725 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0005725_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Gb_03315

Target Alias Description ECC score Gene Family Method Actions
AT4G19100 PAM68 Protein of unknown function (DUF3464) 0.02 OrthoFinder output from all 47 species
Aev_g21605 PAM68 protein involved in PS-II assembly *(PAM68) & original... 0.02 OrthoFinder output from all 47 species
Cpa|evm.model.tig00021434.48 No alias No description available 0.02 OrthoFinder output from all 47 species
Dde_g17957 PAM68 protein involved in PS-II assembly *(PAM68) & original... 0.03 OrthoFinder output from all 47 species
GSVIVT01028843001 No alias Photosynthesis.photophosphorylation.photosystem... 0.03 OrthoFinder output from all 47 species
LOC_Os10g38910.1 LOC_Os10g38910 PAM68 protein involved in PS-II assembly 0.02 OrthoFinder output from all 47 species
Len_g15118 PAM68 protein involved in PS-II assembly *(PAM68) & original... 0.03 OrthoFinder output from all 47 species
Solyc03g007860.1.1 Solyc03g007860 PAM68 protein involved in PS-II assembly 0.05 OrthoFinder output from all 47 species
Spa_g17043 PAM68 protein involved in PS-II assembly *(PAM68) & original... 0.04 OrthoFinder output from all 47 species
Spa_g17044 PAM68 protein involved in PS-II assembly *(PAM68) & original... 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEP HCCA
MF GO:0016701 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen IEP HCCA
MF GO:0016702 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen IEP HCCA
MF GO:0016765 transferase activity, transferring alkyl or aryl (other than methyl) groups IEP HCCA
MF GO:0051213 dioxygenase activity IEP HCCA
BP GO:0055114 obsolete oxidation-reduction process IEP HCCA
InterPro domains Description Start Stop
IPR021855 PAM68-like 405 513
No external refs found!