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  5. Gb_03080

Gb_03080


Description : Class V chitinase OS=Arabidopsis thaliana (sp|o81862|chic_arath : 279.0) & Enzyme classification.EC_3 hydrolases.EC_3.2 glycosylase(50.3.2 : 165.0)


Gene families : OG0000696 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000696_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Gb_03080

Target Alias Description ECC score Gene Family Method Actions
Adi_g077591 No alias EC_3.2 glycosylase & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g34336 No alias EC_3.2 glycosylase & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g17013 No alias EC_3.2 glycosylase & original description: none 0.01 OrthoFinder output from all 47 species
Azfi_s0156.g053688 No alias EC_3.2 glycosylase & original description: CDS=140-1324 0.01 OrthoFinder output from all 47 species
Dac_g21934 No alias EC_3.2 glycosylase & original description: none 0.03 OrthoFinder output from all 47 species
Gb_00910 No alias Class V chitinase OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Gb_10730 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Nbi_g10976 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Nbi_g44200 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
BP GO:0005975 carbohydrate metabolic process IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0005215 transporter activity IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
BP GO:0006810 transport IEP HCCA
MF GO:0015399 primary active transmembrane transporter activity IEP HCCA
MF GO:0016462 pyrophosphatase activity IEP HCCA
MF GO:0016787 hydrolase activity IEP HCCA
MF GO:0016817 hydrolase activity, acting on acid anhydrides IEP HCCA
MF GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides IEP HCCA
MF GO:0016887 ATP hydrolysis activity IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
MF GO:0017111 ribonucleoside triphosphate phosphatase activity IEP HCCA
MF GO:0022804 active transmembrane transporter activity IEP HCCA
MF GO:0022857 transmembrane transporter activity IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0042626 ATPase-coupled transmembrane transporter activity IEP HCCA
BP GO:0051179 localization IEP HCCA
BP GO:0051234 establishment of localization IEP HCCA
BP GO:0055085 transmembrane transport IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
MF GO:0140657 ATP-dependent activity IEP HCCA
InterPro domains Description Start Stop
IPR001223 Glyco_hydro18_cat 59 391
No external refs found!