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  5. Gb_02348

Gb_02348


Description : Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum (sp|p10978|polx_tobac : 146.0)


Gene families : OG0000004 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Gb_02348

Target Alias Description ECC score Gene Family Method Actions
Adi_g046157 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g09535 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g14954 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aev_g15529 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aev_g22867 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g25745 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g33931 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g37774 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g38229 ORF111A not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g44115 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g27539 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene33665.t1 Aspi01Gene33665 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene38908.t1 Aspi01Gene38908 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene40360.t1 Aspi01Gene40360 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene61934.t1 CRK8, Aspi01Gene61934 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene62930.t1 CRK8, Aspi01Gene62930 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene69511.t1 CRK8, Aspi01Gene69511 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g31142 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g54539 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.07G093000.1 CRK8, Ceric.07G093000 not classified & original description: pacid=50627358... 0.03 OrthoFinder output from all 47 species
Ehy_g17799 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g32242 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01031819001 No alias Retrovirus-related Pol polyprotein from transposon TNT... 0.03 OrthoFinder output from all 47 species
Ore_g24039 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g37002 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g42439 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g21767 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pp3c12_15570V3.1 Pp3c12_15570 cysteine-rich RLK (RECEPTOR-like protein kinase) 8 0.03 OrthoFinder output from all 47 species
Pp3c13_3860V3.1 Pp3c13_3860 No annotation 0.02 OrthoFinder output from all 47 species
Pp3c17_2840V3.1 Pp3c17_2840 No annotation 0.01 OrthoFinder output from all 47 species
Pp3c20_550V3.1 Pp3c20_550 cysteine-rich RLK (RECEPTOR-like protein kinase) 8 0.01 OrthoFinder output from all 47 species
Pp3c22_3860V3.1 Pp3c22_3860 No annotation 0.02 OrthoFinder output from all 47 species
Pp3c23_2640V3.1 Pp3c23_2640 No annotation 0.02 OrthoFinder output from all 47 species
Pp3c24_16280V3.1 Pp3c24_16280 No annotation 0.02 OrthoFinder output from all 47 species
Pp3c3_29090V3.1 Pp3c3_29090 DNA/RNA polymerases superfamily protein 0.01 OrthoFinder output from all 47 species
Pp3c3_36040V3.1 Pp3c3_36040 cysteine-rich RLK (RECEPTOR-like protein kinase) 8 0.02 OrthoFinder output from all 47 species
Pp3c4_15120V3.1 Pp3c4_15120 No annotation 0.02 OrthoFinder output from all 47 species
Pp3c4_30310V3.1 Pp3c4_30310 No annotation 0.01 OrthoFinder output from all 47 species
Pp3c4_5390V3.1 Pp3c4_5390 No annotation 0.02 OrthoFinder output from all 47 species
Pp3c5_14290V3.1 Pp3c5_14290 No annotation 0.02 OrthoFinder output from all 47 species
Pp3c6_1560V3.1 Pp3c6_1560 No annotation 0.02 OrthoFinder output from all 47 species
Pp3c7_17660V3.1 Pp3c7_17660 No annotation 0.01 OrthoFinder output from all 47 species
Pp3c8_19680V3.1 Pp3c8_19680 No annotation 0.03 OrthoFinder output from all 47 species
Pp3c9_1850V3.1 Pp3c9_1850 cysteine-rich RLK (RECEPTOR-like protein kinase) 8 0.03 OrthoFinder output from all 47 species
Solyc10g047825.1.1 Solyc10g047825 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
BP GO:0006259 DNA metabolic process IEP HCCA
BP GO:0015074 DNA integration IEP HCCA
BP GO:0090304 nucleic acid metabolic process IEP HCCA

No InterPro domains available for this sequence

No external refs found!