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  5. Gb_02173

Gb_02173


Description : transcription factor (Trihelix)


Gene families : OG0003905 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003905_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Gb_02173

Target Alias Description ECC score Gene Family Method Actions
AT3G54390 No alias sequence-specific DNA binding transcription factors 0.04 OrthoFinder output from all 47 species
Aev_g17188 No alias Trihelix-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Aev_g17591 No alias Trihelix-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Gb_04257 No alias no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
LOC_Os09g38570.1 LOC_Os09g38570 transcription factor (Trihelix) 0.03 OrthoFinder output from all 47 species
MA_102307g0010 No alias transcription factor (Trihelix) 0.03 OrthoFinder output from all 47 species
MA_113047g0010 No alias transcription factor (Trihelix) 0.03 OrthoFinder output from all 47 species
Ore_g05847 No alias Trihelix-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Solyc01g096470.3.1 Solyc01g096470 transcription factor (Trihelix) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000271 polysaccharide biosynthetic process IEP HCCA
MF GO:0005515 protein binding IEP HCCA
BP GO:0006355 regulation of DNA-templated transcription IEP HCCA
BP GO:0007165 signal transduction IEP HCCA
BP GO:0008150 biological_process IEP HCCA
BP GO:0009250 glucan biosynthetic process IEP HCCA
BP GO:0009889 regulation of biosynthetic process IEP HCCA
BP GO:0010468 regulation of gene expression IEP HCCA
BP GO:0010556 regulation of macromolecule biosynthetic process IEP HCCA
BP GO:0016051 carbohydrate biosynthetic process IEP HCCA
MF GO:0016759 cellulose synthase activity IEP HCCA
MF GO:0016760 cellulose synthase (UDP-forming) activity IEP HCCA
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP HCCA
BP GO:0019222 regulation of metabolic process IEP HCCA
BP GO:0030243 cellulose metabolic process IEP HCCA
BP GO:0030244 cellulose biosynthetic process IEP HCCA
BP GO:0031323 regulation of cellular metabolic process IEP HCCA
BP GO:0031326 regulation of cellular biosynthetic process IEP HCCA
BP GO:0033692 cellular polysaccharide biosynthetic process IEP HCCA
BP GO:0034637 cellular carbohydrate biosynthetic process IEP HCCA
MF GO:0035251 UDP-glucosyltransferase activity IEP HCCA
BP GO:0050789 regulation of biological process IEP HCCA
BP GO:0050794 regulation of cellular process IEP HCCA
BP GO:0051171 regulation of nitrogen compound metabolic process IEP HCCA
BP GO:0051252 regulation of RNA metabolic process IEP HCCA
BP GO:0051273 beta-glucan metabolic process IEP HCCA
BP GO:0051274 beta-glucan biosynthetic process IEP HCCA
BP GO:0060255 regulation of macromolecule metabolic process IEP HCCA
BP GO:0065007 biological regulation IEP HCCA
BP GO:0080090 regulation of primary metabolic process IEP HCCA
BP GO:1903506 regulation of nucleic acid-templated transcription IEP HCCA
BP GO:2001141 regulation of RNA biosynthetic process IEP HCCA

No InterPro domains available for this sequence

No external refs found!