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  5. Gb_02142

Gb_02142 (ORF170)


Aliases : ORF170

Description : Retrovirus-related Pol polyprotein from transposon RE2 OS=Arabidopsis thaliana (sp|q9zt94|polr2_arath : 154.0)


Gene families : OG0000012 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Gb_02142

Target Alias Description ECC score Gene Family Method Actions
Gb_03166 CRK8 Retrovirus-related Pol polyprotein from transposon RE2... 0.06 OrthoFinder output from all 47 species
Gb_04812 No alias Retrovirus-related Pol polyprotein from transposon RE1... 0.01 OrthoFinder output from all 47 species
Gb_05080 No alias Retrovirus-related Pol polyprotein from transposon TNT... 0.02 OrthoFinder output from all 47 species
Gb_10176 No alias Retrovirus-related Pol polyprotein from transposon RE2... 0.02 OrthoFinder output from all 47 species
Gb_10191 CRK8 Retrovirus-related Pol polyprotein from transposon TNT... 0.02 OrthoFinder output from all 47 species
Gb_13743 ORF240B Retrovirus-related Pol polyprotein from transposon RE1... 0.06 OrthoFinder output from all 47 species
Gb_18380 ORF170 Retrovirus-related Pol polyprotein from transposon RE1... 0.04 OrthoFinder output from all 47 species
Gb_18988 CRK8 Retrovirus-related Pol polyprotein from transposon TNT... 0.02 OrthoFinder output from all 47 species
Gb_18989 CRK8 Retrovirus-related Pol polyprotein from transposon TNT... 0.01 OrthoFinder output from all 47 species
Gb_20651 No alias Retrovirus-related Pol polyprotein from transposon RE1... 0.02 OrthoFinder output from all 47 species
Gb_21706 ORF170 Uncharacterized mitochondrial protein AtMg00820... 0.08 OrthoFinder output from all 47 species
Gb_23452 CRK8 Retrovirus-related Pol polyprotein from transposon TNT... 0.01 OrthoFinder output from all 47 species
Gb_23888 ORF240B Retrovirus-related Pol polyprotein from transposon RE2... 0.02 OrthoFinder output from all 47 species
Gb_26000 No alias Retrovirus-related Pol polyprotein from transposon RE1... 0.03 OrthoFinder output from all 47 species
Gb_32087 CRK8 Retrovirus-related Pol polyprotein from transposon RE1... 0.01 OrthoFinder output from all 47 species
Gb_35456 ORF240B Retrovirus-related Pol polyprotein from transposon RE1... 0.03 OrthoFinder output from all 47 species
Gb_40420 No alias Retrovirus-related Pol polyprotein from transposon TNT... 0.01 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR013103 RVT_2 65 179
No external refs found!