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Description : protein factor NHP2L1/SNU13 of U4/U6 small nuclear ribonucleoprotein particle (snRNP). component Snu13 of snoRNP rRNA methylation complex
Gene families : OG0002183 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002183_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: Gb_01849 | |
| Cluster | HCCA: Cluster_161 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00029p00103630 | evm_27.TU.AmTr_v1... | RNA processing.RNA modification.rRNA/tRNA... | 0.02 | OrthoFinder output from all 47 species | |
| AMTR_s00043p00189790 | evm_27.TU.AmTr_v1... | RNA processing.RNA modification.rRNA/tRNA... | 0.1 | OrthoFinder output from all 47 species | |
| AT4G12600 | No alias | Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein | 0.11 | OrthoFinder output from all 47 species | |
| AT5G20160 | No alias | Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein | 0.17 | OrthoFinder output from all 47 species | |
| Als_g09839 | No alias | component *(Snu13) of snoRNP rRNA methylation complex &... | 0.03 | OrthoFinder output from all 47 species | |
| Als_g25287 | No alias | component *(Snu13) of snoRNP rRNA methylation complex &... | 0.04 | OrthoFinder output from all 47 species | |
| Als_g45351 | No alias | component *(Snu13) of snoRNP rRNA methylation complex &... | 0.03 | OrthoFinder output from all 47 species | |
| Aspi01Gene59957.t1 | Aspi01Gene59957 | component *(Snu13) of snoRNP rRNA methylation complex &... | 0.05 | OrthoFinder output from all 47 species | |
| Cba_g29914 | No alias | component *(Snu13) of snoRNP rRNA methylation complex &... | 0.03 | OrthoFinder output from all 47 species | |
| Ceric.03G070800.1 | Ceric.03G070800 | component *(Snu13) of snoRNP rRNA methylation complex &... | 0.07 | OrthoFinder output from all 47 species | |
| Cpa|evm.model.tig00000600.11 | No alias | RNA processing.RNA modification.rRNA/tRNA... | 0.02 | OrthoFinder output from all 47 species | |
| Cre06.g249250 | No alias | RNA processing.RNA modification.rRNA/tRNA... | 0.15 | OrthoFinder output from all 47 species | |
| Dac_g29609 | No alias | component *(Snu13) of snoRNP rRNA methylation complex &... | 0.03 | OrthoFinder output from all 47 species | |
| Dcu_g19050 | No alias | component *(Snu13) of snoRNP rRNA methylation complex &... | 0.03 | OrthoFinder output from all 47 species | |
| GSVIVT01015520001 | No alias | RNA processing.RNA modification.rRNA/tRNA... | 0.06 | OrthoFinder output from all 47 species | |
| LOC_Os03g13800.1 | LOC_Os03g13800 | protein factor NHP2L1/SNU13 of U4/U6 small nuclear... | 0.11 | OrthoFinder output from all 47 species | |
| LOC_Os10g03540.1 | LOC_Os10g03540 | protein factor NHP2L1/SNU13 of U4/U6 small nuclear... | 0.06 | OrthoFinder output from all 47 species | |
| MA_10201g0010 | No alias | protein factor NHP2L1/SNU13 of U4/U6 small nuclear... | 0.03 | OrthoFinder output from all 47 species | |
| MA_16906g0010 | No alias | protein factor NHP2L1/SNU13 of U4/U6 small nuclear... | 0.09 | OrthoFinder output from all 47 species | |
| MA_433779g0010 | No alias | protein factor NHP2L1/SNU13 of U4/U6 small nuclear... | 0.13 | OrthoFinder output from all 47 species | |
| Mp7g12360.1 | No alias | protein factor NHP2L1/SNU13 of U4/U6 small nuclear... | 0.03 | OrthoFinder output from all 47 species | |
| Ore_g24962 | No alias | component *(Snu13) of snoRNP rRNA methylation complex &... | 0.02 | OrthoFinder output from all 47 species | |
| Pir_g09212 | No alias | component *(Snu13) of snoRNP rRNA methylation complex &... | 0.03 | OrthoFinder output from all 47 species | |
| Pp3c17_18010V3.1 | Pp3c17_18010 | Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein | 0.03 | OrthoFinder output from all 47 species | |
| Pp3c1_37110V3.1 | Pp3c1_37110 | Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein | 0.02 | OrthoFinder output from all 47 species | |
| Sam_g08742 | No alias | component *(Snu13) of snoRNP rRNA methylation complex &... | 0.13 | OrthoFinder output from all 47 species | |
| Sam_g08743 | No alias | component *(Snu13) of snoRNP rRNA methylation complex &... | 0.08 | OrthoFinder output from all 47 species | |
| Solyc09g011420.3.1 | Solyc09g011420 | protein factor NHP2L1/SNU13 of U4/U6 small nuclear... | 0.05 | OrthoFinder output from all 47 species | |
| Spa_g56417 | No alias | component *(Snu13) of snoRNP rRNA methylation complex &... | 0.03 | OrthoFinder output from all 47 species | |
| Tin_g17080 | No alias | component *(Snu13) of snoRNP rRNA methylation complex &... | 0.03 | OrthoFinder output from all 47 species | |
| Zm00001e001004_P001 | Zm00001e001004 | protein factor NHP2L1/SNU13 of U4/U6 small nuclear... | 0.07 | OrthoFinder output from all 47 species | |
| Zm00001e038611_P002 | Zm00001e038611 | protein factor NHP2L1/SNU13 of U4/U6 small nuclear... | 0.16 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| BP | GO:0000413 | protein peptidyl-prolyl isomerization | IEP | HCCA |
| MF | GO:0003755 | peptidyl-prolyl cis-trans isomerase activity | IEP | HCCA |
| MF | GO:0016853 | isomerase activity | IEP | HCCA |
| MF | GO:0016859 | cis-trans isomerase activity | IEP | HCCA |
| BP | GO:0018193 | peptidyl-amino acid modification | IEP | HCCA |
| BP | GO:0018208 | peptidyl-proline modification | IEP | HCCA |
No InterPro domains available for this sequence
| No external refs found! |