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  5. Gb_01598

Gb_01598


Description : Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum (sp|p10978|polx_tobac : 80.1)


Gene families : OG0000039 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Gb_01598

Target Alias Description ECC score Gene Family Method Actions
Adi_g048291 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g056397 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g066947 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g124558 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g25954 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aev_g47859 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g47921 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g31783 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene00653.t1 Aspi01Gene00653 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene03850.t1 Aspi01Gene03850 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene04017.t1 DHS2, Aspi01Gene04017 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene09137.t1 Aspi01Gene09137 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene47344.t1 Aspi01Gene47344 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene58286.t1 Aspi01Gene58286 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene58807.t1 Aspi01Gene58807 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene65251.t1 Aspi01Gene65251 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene69081.t1 Aspi01Gene69081 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g36840 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g46635 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g51804 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g17200 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Gb_08225 No alias Retrovirus-related Pol polyprotein from transposon TNT... 0.03 OrthoFinder output from all 47 species
Gb_11684 No alias Retrovirus-related Pol polyprotein from transposon TNT... 0.03 OrthoFinder output from all 47 species
Gb_16490 ORF170 Retrovirus-related Pol polyprotein from transposon TNT... 0.04 OrthoFinder output from all 47 species
Gb_27398 ORF170 Retrovirus-related Pol polyprotein from transposon TNT... 0.04 OrthoFinder output from all 47 species
Gb_41806 No alias Retrovirus-related Pol polyprotein from transposon TNT... 0.07 OrthoFinder output from all 47 species
Len_g28515 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g45948 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g11340 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g11983 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g16639 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g24025 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Lfl_g38209 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g38860 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g03888 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g19339 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g03154 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g27031 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g44968 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g59295 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g12650 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pnu_g18702 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pnu_g23852 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g24329 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g25309 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0005509 calcium ion binding IEP HCCA
MF GO:0005543 phospholipid binding IEP HCCA
MF GO:0005544 calcium-dependent phospholipid binding IEP HCCA
MF GO:0008289 lipid binding IEP HCCA

No InterPro domains available for this sequence

No external refs found!