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Gb_01521 (ATARFA1F, ARFA1F)


Aliases : ATARFA1F, ARFA1F

Description : ARF-GTPase


Gene families : OG0000301 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000301_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Gb_01521
Cluster HCCA: Cluster_146

Target Alias Description ECC score Gene Family Method Actions
AT2G15310 ATARFB1A, ARFB1A ADP-ribosylation factor B1A 0.04 OrthoFinder output from all 47 species
Cba_g71009 ATARFB1B, ARFB1B ARF-GTPase *(ARFA) & original description: none 0.02 OrthoFinder output from all 47 species
Dac_g12228 ATARFA1B, ARFA1B ARF-GTPase *(ARF1) & original description: none 0.04 OrthoFinder output from all 47 species
GSVIVT01000224001 ATARFA1F, ARFA1F Vesicle trafficking.Coat protein I (COPI) coatomer... 0.08 OrthoFinder output from all 47 species
Len_g05681 ATARFA1B, ARFA1B ARF-GTPase *(ARF1) & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g28749 ATARFB1B, ARFB1B ARF-GTPase *(ARFA) & original description: none 0.04 OrthoFinder output from all 47 species
Solyc02g092970.3.1 ATARF1, ARF1,... ARF-GTPase 0.03 OrthoFinder output from all 47 species
Solyc03g096910.3.1 ATARFB1C,... ARF-GTPase 0.03 OrthoFinder output from all 47 species
Zm00001e011790_P001 ATARFA1B,... ARF-GTPase 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005525 GTP binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0005509 calcium ion binding IEP HCCA
MF GO:0005543 phospholipid binding IEP HCCA
MF GO:0005544 calcium-dependent phospholipid binding IEP HCCA
BP GO:0005984 disaccharide metabolic process IEP HCCA
BP GO:0005985 sucrose metabolic process IEP HCCA
MF GO:0008289 lipid binding IEP HCCA
BP GO:0009311 oligosaccharide metabolic process IEP HCCA
MF GO:0016157 sucrose synthase activity IEP HCCA
MF GO:0030599 pectinesterase activity IEP HCCA
MF GO:0035251 UDP-glucosyltransferase activity IEP HCCA
BP GO:0042545 cell wall modification IEP HCCA
BP GO:0044262 cellular carbohydrate metabolic process IEP HCCA
BP GO:0045229 external encapsulating structure organization IEP HCCA
MF GO:0046527 glucosyltransferase activity IEP HCCA
MF GO:0052689 carboxylic ester hydrolase activity IEP HCCA
BP GO:0071554 cell wall organization or biogenesis IEP HCCA
BP GO:0071555 cell wall organization IEP HCCA
InterPro domains Description Start Stop
IPR006689 Small_GTPase_ARF/SAR 5 177
No external refs found!