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  5. Gb_01300

Gb_01300


Description : Putative disease resistance protein RGA3 OS=Solanum bulbocastanum (sp|q7xa40|rga3_solbu : 200.0)


Gene families : OG0000196 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000196_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Gb_01300

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00005p00238210 evm_27.TU.AmTr_v1... Probable disease resistance protein At4g14610... 0.02 OrthoFinder output from all 47 species
AMTR_s00029p00123030 RPS5,... Disease resistance protein RPS5 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
AMTR_s00029p00123080 evm_27.TU.AmTr_v1... No description available 0.03 OrthoFinder output from all 47 species
AMTR_s00078p00183570 evm_27.TU.AmTr_v1... Probable disease resistance protein At1g61310... 0.02 OrthoFinder output from all 47 species
AMTR_s00078p00183610 evm_27.TU.AmTr_v1... Disease resistance protein RPS2 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
AMTR_s00121p00125720 evm_27.TU.AmTr_v1... Probable disease resistance protein At1g61180... 0.04 OrthoFinder output from all 47 species
AT1G51480 No alias Disease resistance protein (CC-NBS-LRR class) family 0.03 OrthoFinder output from all 47 species
AT4G26090 RPS2 NB-ARC domain-containing disease resistance protein 0.04 OrthoFinder output from all 47 species
Aob_g31823 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g57158 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
GSVIVT01038446001 No alias Probable disease resistance protein At1g52660... 0.06 OrthoFinder output from all 47 species
Gb_37091 No alias Probable disease resistance protein At1g15890... 0.04 OrthoFinder output from all 47 species
LOC_Os03g14900.1 LOC_Os03g14900 Disease resistance protein RPS2 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
LOC_Os09g14100.1 RPS2, LOC_Os09g14100 Disease resistance protein RPS2 OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
LOC_Os12g10410.1 RPS2, LOC_Os12g10410 Disease resistance protein RPS2 OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
MA_10322161g0010 No alias no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
MA_10436071g0010 No alias Probable disease resistance protein At4g27220... 0.04 OrthoFinder output from all 47 species
MA_128726g0010 No alias no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
MA_40435g0010 No alias Probable disease resistance protein At1g61310... 0.08 OrthoFinder output from all 47 species
MA_48202g0010 No alias Probable disease resistance protein At5g63020... 0.05 OrthoFinder output from all 47 species
MA_5270774g0010 No alias no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
MA_5551624g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
MA_562728g0010 No alias no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
MA_8348g0010 No alias no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
Mp3g09150.1 No alias Disease resistance protein RPS2 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Pp3c19_2470V3.1 Pp3c19_2470 NB-ARC domain-containing disease resistance protein 0.02 OrthoFinder output from all 47 species
Pp3c19_2480V3.1 Pp3c19_2480 NB-ARC domain-containing disease resistance protein 0.01 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0043531 ADP binding IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR041118 Rx_N 6 89
IPR002182 NB-ARC 164 355
No external refs found!