1. Home
  2. Species
  3. Ginkgo biloba
  4. Sequence
  5. Gb_01018

Gb_01018 (OPT4, ATOPT4)


Aliases : OPT4, ATOPT4

Description : oligopeptide transporter (OPT)


Gene families : OG0000539 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000539_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Gb_01018
Cluster HCCA: Cluster_1

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00061p00190940 OPT1, ATOPT1,... Solute transport.carrier-mediated transport.OPT... 0.03 OrthoFinder output from all 47 species
Aev_g44994 OPT7, ATOPT7 oligopeptide transporter *(OPT) & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene04420.t1 ATOPT2, OPT2,... oligopeptide transporter *(OPT) & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01005133001 OPT3, ATOPT3 Solute transport.carrier-mediated transport.OPT... 0.04 OrthoFinder output from all 47 species
GSVIVT01038513001 OPT4, ATOPT4 Solute transport.carrier-mediated transport.OPT... 0.04 OrthoFinder output from all 47 species
LOC_Os03g54000.1 OPT3, ATOPT3,... oligopeptide transporter (OPT) 0.03 OrthoFinder output from all 47 species
MA_10185385g0010 OPT4, ATOPT4 oligopeptide transporter (OPT) 0.05 OrthoFinder output from all 47 species
Solyc02g083740.2.1 OPT7, ATOPT7,... oligopeptide transporter (OPT) 0.03 OrthoFinder output from all 47 species
Solyc03g033460.3.1 OPT7, ATOPT7,... oligopeptide transporter (OPT) 0.03 OrthoFinder output from all 47 species
Spa_g13471 OPT4, ATOPT4 oligopeptide transporter *(OPT) & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g18436 ATOPT2, OPT2 oligopeptide transporter *(OPT) & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e005697_P002 OPT3, ATOPT3,... oligopeptide transporter (OPT) 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
BP GO:0055085 transmembrane transport IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0004672 protein kinase activity IEP HCCA
MF GO:0005506 iron ion binding IEP HCCA
BP GO:0006468 protein phosphorylation IEP HCCA
BP GO:0006793 phosphorus metabolic process IEP HCCA
BP GO:0006796 phosphate-containing compound metabolic process IEP HCCA
BP GO:0006807 nitrogen compound metabolic process IEP HCCA
MF GO:0016301 kinase activity IEP HCCA
BP GO:0016310 phosphorylation IEP HCCA
MF GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEP HCCA
MF GO:0016740 transferase activity IEP HCCA
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP HCCA
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP HCCA
BP GO:0019538 protein metabolic process IEP HCCA
MF GO:0020037 heme binding IEP HCCA
BP GO:0036211 protein modification process IEP HCCA
MF GO:0043167 ion binding IEP HCCA
BP GO:0043170 macromolecule metabolic process IEP HCCA
BP GO:0043412 macromolecule modification IEP HCCA
BP GO:0044237 cellular metabolic process IEP HCCA
MF GO:0046906 tetrapyrrole binding IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:0140096 catalytic activity, acting on a protein IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
BP GO:1901564 organonitrogen compound metabolic process IEP HCCA
InterPro domains Description Start Stop
IPR004813 OPT 509 821
IPR004813 OPT 43 394
No external refs found!