Gb_00601

Description : RNA editing factor (OTP82)

Gene families : OG0014774 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0014774_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Gb_00601

Target	Alias	Description	ECC score	Gene Family Method	Actions
Gb_15537	CRR22	Pentatricopeptide repeat-containing protein At3g12770...	0.06	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0008270	zinc ion binding	IEA	Interproscan
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043169	cation binding	None	Extended
MF	GO:0046872	metal ion binding	None	Extended
MF	GO:0046914	transition metal ion binding	None	Extended

Type	GO Term	Name	Evidence	Source
MF	GO:0003887	DNA-directed DNA polymerase activity	IEP	HCCA
MF	GO:0004527	exonuclease activity	IEP	HCCA
BP	GO:0006260	DNA replication	IEP	HCCA
MF	GO:0008408	3'-5' exonuclease activity	IEP	HCCA
MF	GO:0034061	DNA polymerase activity	IEP	HCCA
MF	GO:0140097	catalytic activity, acting on DNA	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR002885	Pentatricopeptide_repeat	447	494
IPR002885	Pentatricopeptide_repeat	315	362
IPR002885	Pentatricopeptide_repeat	548	595
IPR002885	Pentatricopeptide_repeat	183	229
IPR002885	Pentatricopeptide_repeat	649	696
IPR032867	DYW_dom	822	946
IPR002885	Pentatricopeptide_repeat	722	747
IPR002885	Pentatricopeptide_repeat	130	151
IPR002885	Pentatricopeptide_repeat	522	547
IPR002885	Pentatricopeptide_repeat	259	282
IPR002885	Pentatricopeptide_repeat	390	412

External Links

No external refs found!