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  5. Gb_00539

Gb_00539


Description : Stem-specific protein TSJT1 OS=Nicotiana tabacum (sp|p24805|tsjt1_tobac : 127.0)


Gene families : OG0000573 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000573_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Gb_00539

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00002p00270110 evm_27.TU.AmTr_v1... Stem-specific protein TSJT1 OS=Nicotiana tabacum 0.03 OrthoFinder output from all 47 species
AMTR_s00025p00066790 ATAILP1, AILP1,... Stem-specific protein TSJT1 OS=Nicotiana tabacum 0.03 OrthoFinder output from all 47 species
Adi_g012224 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Adi_g040808 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g12030 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g13918 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g22018 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Als_g03583 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g13484 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g03018 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Gb_16125 ATAILP1, AILP1 Stem-specific protein TSJT1 OS=Nicotiana tabacum... 0.03 OrthoFinder output from all 47 species
Len_g03632 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
MA_42105g0010 No alias no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
MA_456616g0010 No alias no hits & (original description: none) 0.07 OrthoFinder output from all 47 species
Nbi_g37384 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g11326 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g03795 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g12218 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g28867 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Smo270173 No alias Stem-specific protein TSJT1 OS=Nicotiana tabacum 0.03 OrthoFinder output from all 47 species
Solyc12g013700.2.1 Solyc12g013700 Stem-specific protein TSJT1 OS=Nicotiana tabacum... 0.01 OrthoFinder output from all 47 species
Spa_g38350 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g54897 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Tin_g27502 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0016491 oxidoreductase activity IEP HCCA
MF GO:0016620 oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor IEP HCCA
MF GO:0016903 oxidoreductase activity, acting on the aldehyde or oxo group of donors IEP HCCA
BP GO:0055114 obsolete oxidation-reduction process IEP HCCA
InterPro domains Description Start Stop
IPR024286 DUF3700 2 228
No external refs found!