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  5. Gb_00199

Gb_00199 (OTP84)


Aliases : OTP84

Description : Pentatricopeptide repeat-containing protein At3g03580 OS=Arabidopsis thaliana (sp|q9ss60|pp210_arath : 626.0)


Gene families : OG0000000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Gb_00199
Cluster HCCA: Cluster_157

Target Alias Description ECC score Gene Family Method Actions
Gb_00201 CRR22 Pentatricopeptide repeat-containing protein At1g11290,... 0.03 OrthoFinder output from all 47 species
Gb_04533 CRR22 RNA editing factor (OTP82) 0.03 OrthoFinder output from all 47 species
Gb_05123 No alias Pentatricopeptide repeat-containing protein At4g33170... 0.03 OrthoFinder output from all 47 species
Gb_09146 OTP84 Pentatricopeptide repeat-containing protein At3g03580... 0.06 OrthoFinder output from all 47 species
Gb_11039 VAC1, ECB2, ATECB2 RNA editing factor (CRR21) 0.03 OrthoFinder output from all 47 species
Gb_11667 CRR22 Pentatricopeptide repeat-containing protein At3g03580... 0.08 OrthoFinder output from all 47 species
Gb_16366 CRR22 Pentatricopeptide repeat-containing protein At3g57430,... 0.03 OrthoFinder output from all 47 species
Gb_16955 CRR22 Pentatricopeptide repeat-containing protein At1g11290,... 0.03 OrthoFinder output from all 47 species
Gb_18359 CRR22 Pentatricopeptide repeat-containing protein At3g12770... 0.04 OrthoFinder output from all 47 species
Gb_21055 OTP84 Pentatricopeptide repeat-containing protein DOT4,... 0.04 OrthoFinder output from all 47 species
Gb_21351 VAC1, ECB2, ATECB2 RNA editing factor (CRR21) 0.05 OrthoFinder output from all 47 species
Gb_22288 OTP84 Pentatricopeptide repeat-containing protein DOT4,... 0.03 OrthoFinder output from all 47 species
Gb_22805 No alias Pentatricopeptide repeat-containing protein At4g13650... 0.03 OrthoFinder output from all 47 species
Gb_23605 No alias Pentatricopeptide repeat-containing protein At2g27610... 0.03 OrthoFinder output from all 47 species
Gb_24126 CRR22 Pentatricopeptide repeat-containing protein At3g12770... 0.05 OrthoFinder output from all 47 species
Gb_25283 CRR22 Pentatricopeptide repeat-containing protein At1g11290,... 0.11 OrthoFinder output from all 47 species
Gb_25604 No alias Putative pentatricopeptide repeat-containing protein... 0.03 OrthoFinder output from all 47 species
Gb_26695 No alias Pentatricopeptide repeat-containing protein At4g13650... 0.04 OrthoFinder output from all 47 species
Gb_27469 CRR22 Pentatricopeptide repeat-containing protein At4g13650... 0.03 OrthoFinder output from all 47 species
Gb_28037 CRR22 RNA editing factor (MEF19). RNA editing factor (OTP82) 0.05 OrthoFinder output from all 47 species
Gb_28390 CRR22 Pentatricopeptide repeat-containing protein At3g12770... 0.06 OrthoFinder output from all 47 species
Gb_28902 EMB2261 Pentatricopeptide repeat-containing protein At3g49170,... 0.04 OrthoFinder output from all 47 species
Gb_29466 CRR22 Pentatricopeptide repeat-containing protein At2g22070... 0.06 OrthoFinder output from all 47 species
Gb_32448 No alias Pentatricopeptide repeat-containing protein At4g13650... 0.04 OrthoFinder output from all 47 species
Gb_33294 No alias Pentatricopeptide repeat-containing protein At2g13600... 0.03 OrthoFinder output from all 47 species
Gb_33697 CRR22 Pentatricopeptide repeat-containing protein At1g11290,... 0.04 OrthoFinder output from all 47 species
Gb_35395 No alias Pentatricopeptide repeat-containing protein At4g13650... 0.03 OrthoFinder output from all 47 species
Gb_36172 REME1 Pentatricopeptide repeat-containing protein At2g03880,... 0.04 OrthoFinder output from all 47 species
Gb_37176 CRR22 Pentatricopeptide repeat-containing protein At2g22070... 0.08 OrthoFinder output from all 47 species
Gb_37820 CRR22 Pentatricopeptide repeat-containing protein At1g11290,... 0.06 OrthoFinder output from all 47 species
Gb_38301 CRR22 Pentatricopeptide repeat-containing protein At1g11290,... 0.05 OrthoFinder output from all 47 species
Gb_38897 DOT4 Pentatricopeptide repeat-containing protein At4g02750... 0.04 OrthoFinder output from all 47 species
Gb_39440 CRR22 Pentatricopeptide repeat-containing protein At1g08070,... 0.05 OrthoFinder output from all 47 species
Gb_41325 CRR22 RNA editing factor (MEF19) 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0008270 zinc ion binding IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR032867 DYW_dom 797 870
IPR002885 Pentatricopeptide_repeat 396 418
IPR002885 Pentatricopeptide_repeat 699 722
IPR002885 Pentatricopeptide_repeat 624 671
IPR002885 Pentatricopeptide_repeat 421 465
IPR002885 Pentatricopeptide_repeat 220 267
IPR002885 Pentatricopeptide_repeat 119 166
IPR002885 Pentatricopeptide_repeat 321 368
IPR002885 Pentatricopeptide_repeat 522 570
No external refs found!