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  5. Cpa|evm.model.tig00021682.6

Cpa|evm.model.tig00021682.6


No description available


Gene families : OG0006517 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0006517_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cpa|evm.model.tig00021682.6

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00133p00054340 evm_27.TU.AmTr_v1... PsbP domain-containing protein 3, chloroplastic... 0.03 OrthoFinder output from all 47 species
AT1G76450 No alias Photosystem II reaction center PsbP family protein 0.02 OrthoFinder output from all 47 species
Aev_g38210 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g08526 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g06130 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.16G011400.1 Ceric.16G011400 not classified & original description: pacid=50589110... 0.03 OrthoFinder output from all 47 species
Dde_g07431 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01013427001 No alias PsbP domain-containing protein 3, chloroplastic... 0.02 OrthoFinder output from all 47 species
Lfl_g05889 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g06533 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g30711 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Pir_g08785 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g49102 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Smo448162 No alias PsbP domain-containing protein 3, chloroplastic... 0.03 OrthoFinder output from all 47 species
Tin_g15416 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Zm00001e003568_P001 Zm00001e003568 PsbP domain-containing protein 3, chloroplastic... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005509 calcium ion binding IEA Interproscan
CC GO:0009523 photosystem II IEA Interproscan
CC GO:0009654 photosystem II oxygen evolving complex IEA Interproscan
BP GO:0015979 photosynthesis IEA Interproscan
CC GO:0019898 extrinsic component of membrane IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0003941 L-serine ammonia-lyase activity IEP HCCA
BP GO:0005996 monosaccharide metabolic process IEP HCCA
BP GO:0006006 glucose metabolic process IEP HCCA
BP GO:0006094 gluconeogenesis IEP HCCA
MF GO:0009055 electron transfer activity IEP HCCA
BP GO:0016051 carbohydrate biosynthetic process IEP HCCA
MF GO:0016840 carbon-nitrogen lyase activity IEP HCCA
MF GO:0016841 ammonia-lyase activity IEP HCCA
BP GO:0019318 hexose metabolic process IEP HCCA
BP GO:0019319 hexose biosynthetic process IEP HCCA
BP GO:0019725 cellular homeostasis IEP HCCA
MF GO:0020037 heme binding IEP HCCA
BP GO:0042592 homeostatic process IEP HCCA
BP GO:0045454 cell redox homeostasis IEP HCCA
BP GO:0046364 monosaccharide biosynthetic process IEP HCCA
MF GO:0046906 tetrapyrrole binding IEP HCCA
MF GO:0050662 obsolete coenzyme binding IEP HCCA
MF GO:0051536 iron-sulfur cluster binding IEP HCCA
MF GO:0051537 2 iron, 2 sulfur cluster binding IEP HCCA
MF GO:0051539 4 iron, 4 sulfur cluster binding IEP HCCA
MF GO:0051540 metal cluster binding IEP HCCA
InterPro domains Description Start Stop
IPR002683 PsbP_C 359 503
No external refs found!