1. Home
  2. Species
  3. Cyanophora paradoxa
  4. Sequence
  5. Cpa|evm.model.tig00021617.18

Cpa|evm.model.tig00021617.18


No description available


Gene families : OG0001331 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001331_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cpa|evm.model.tig00021617.18
Cluster HCCA: Cluster_71

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00038p00097730 evm_27.TU.AmTr_v1... Protein RETICULATA-RELATED 4, chloroplastic... 0.01 OrthoFinder output from all 47 species
AT2G40400 No alias Protein of unknown function (DUF399 and DUF3411) 0.03 OrthoFinder output from all 47 species
AT3G56140 No alias Protein of unknown function (DUF399 and DUF3411) 0.01 OrthoFinder output from all 47 species
Adi_g048192 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g088925 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Aev_g02433 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g27723 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Als_g23936 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g34117 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g01529 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aob_g04442 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g09832 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene21405.t1 Aspi01Gene21405 not classified & original description: none 0.01 OrthoFinder output from all 47 species
Azfi_s0006.g010109 No alias not classified & original description: CDS=336-1601 0.02 OrthoFinder output from all 47 species
Azfi_s0055.g033944 No alias not classified & original description: CDS=18-2474 0.01 OrthoFinder output from all 47 species
Cba_g03217 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.22G078500.1 Ceric.22G078500 not classified & original description: pacid=50614469... 0.03 OrthoFinder output from all 47 species
Ceric.29G029100.1 Ceric.29G029100 not classified & original description: pacid=50624979... 0.02 OrthoFinder output from all 47 species
Dac_g18040 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dac_g22117 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g01915 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g02819 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g06291 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g07732 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Ehy_g11697 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ehy_g22985 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
GSVIVT01032735001 No alias Protein RETICULATA-RELATED 6, chloroplastic... 0.01 OrthoFinder output from all 47 species
LOC_Os01g61120.1 LOC_Os01g61120 Protein RETICULATA-RELATED 6, chloroplastic... 0.02 OrthoFinder output from all 47 species
LOC_Os05g32230.1 LOC_Os05g32230 Protein RETICULATA-RELATED 4, chloroplastic... 0.01 OrthoFinder output from all 47 species
Len_g11651 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Lfl_g02340 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g04673 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g35960 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
MA_10429062g0010 No alias Protein RETICULATA-RELATED 5, chloroplastic... 0.02 OrthoFinder output from all 47 species
Msp_g12361 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Msp_g15648 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Nbi_g02954 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g11767 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Ore_g20912 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g20049 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g38821 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Pnu_g07921 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g08153 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g57518 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0041.g012586 No alias not classified & original description: CDS=235-2685 0.01 OrthoFinder output from all 47 species
Sam_g08338 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Sam_g22685 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Sam_g35505 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Smo177305 No alias Protein RETICULATA-RELATED 5, chloroplastic... 0.02 OrthoFinder output from all 47 species
Solyc01g087750.4.1 Solyc01g087750 Protein RETICULATA-RELATED 4, chloroplastic... 0.01 OrthoFinder output from all 47 species
Spa_g07578 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g22578 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Spa_g52655 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Tin_g13626 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g19385 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Zm00001e019415_P003 Zm00001e019415 Protein RETICULATA-RELATED 6, chloroplastic... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0004788 thiamine diphosphokinase activity IEP HCCA
BP GO:0006766 vitamin metabolic process IEP HCCA
BP GO:0006767 water-soluble vitamin metabolic process IEP HCCA
BP GO:0006790 sulfur compound metabolic process IEP HCCA
MF GO:0008233 peptidase activity IEP HCCA
MF GO:0008237 metallopeptidase activity IEP HCCA
BP GO:0009110 vitamin biosynthetic process IEP HCCA
BP GO:0009229 thiamine diphosphate biosynthetic process IEP HCCA
MF GO:0016778 diphosphotransferase activity IEP HCCA
BP GO:0042357 thiamine diphosphate metabolic process IEP HCCA
BP GO:0042364 water-soluble vitamin biosynthetic process IEP HCCA
BP GO:0042723 thiamine-containing compound metabolic process IEP HCCA
BP GO:0042724 thiamine-containing compound biosynthetic process IEP HCCA
BP GO:0044272 sulfur compound biosynthetic process IEP HCCA
BP GO:0044283 small molecule biosynthetic process IEP HCCA
MF GO:0046983 protein dimerization activity IEP HCCA
BP GO:0072527 pyrimidine-containing compound metabolic process IEP HCCA
BP GO:0072528 pyrimidine-containing compound biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR021825 RETICULATA-related 167 244
IPR021825 RETICULATA-related 111 165
No external refs found!