- Species
- Tools
- Expression Profiles
- Compare profiles
- Create heatmap
- Export expression levels
- Expression Specificity
- Compare specificities
- Find specific profiles
- Co-expression Networks
- Create custom network
- Find enriched clusters
- Search
Aliases : ATCRY2, CRY2, PHH1, AT-PHH1, FHA
Description : Cryptochrome-1 OS=Arabidopsis thaliana
Gene families : OG0000814 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000814_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: Cpa|evm.model.tig00021579.19 | |
| Cluster | HCCA: Cluster_71 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00038p00182380 | HY4, ATCRY1,... | External stimuli response.light.UV-A/blue... | 0.01 | OrthoFinder output from all 47 species | |
| AT1G04400 | ATCRY2, CRY2,... | cryptochrome 2 | 0.02 | OrthoFinder output from all 47 species | |
| AT4G08920 | HY4, ATCRY1,... | cryptochrome 1 | 0.02 | OrthoFinder output from all 47 species | |
| Adi_g109201 | HY4, ATCRY1,... | cryptochrome photoreceptor *(CRY) & original description: none | 0.01 | OrthoFinder output from all 47 species | |
| Adi_g114249 | HY4, ATCRY1,... | cryptochrome photoreceptor *(CRY) & original description: none | 0.01 | OrthoFinder output from all 47 species | |
| Ala_g05464 | HY4, ATCRY1,... | cryptochrome photoreceptor *(CRY) & original description: none | 0.01 | OrthoFinder output from all 47 species | |
| Ala_g07140 | HY4, ATCRY1,... | cryptochrome photoreceptor *(CRY) & original description: none | 0.01 | OrthoFinder output from all 47 species | |
| Als_g46007 | HY4, ATCRY1,... | cryptochrome photoreceptor *(CRY) & original description: none | 0.01 | OrthoFinder output from all 47 species | |
| Aspi01Gene40463.t1 | HY4, ATCRY1,... | cryptochrome photoreceptor *(CRY) & original description: none | 0.01 | OrthoFinder output from all 47 species | |
| Cba_g01276 | HY4, ATCRY1,... | cryptochrome photoreceptor *(CRY) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Dde_g04841 | HY4, ATCRY1,... | cryptochrome photoreceptor *(CRY) & original description: none | 0.01 | OrthoFinder output from all 47 species | |
| Dde_g07223 | HY4, ATCRY1,... | cryptochrome photoreceptor *(CRY) & original description: none | 0.01 | OrthoFinder output from all 47 species | |
| Ehy_g08629 | HY4, ATCRY1,... | cryptochrome photoreceptor *(CRY) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ehy_g08682 | HY4, ATCRY1,... | cryptochrome photoreceptor *(CRY) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| LOC_Os04g37920.1 | HY4, ATCRY1,... | cryptochrome photoreceptor (CRY) | 0.02 | OrthoFinder output from all 47 species | |
| Len_g16363 | HY4, ATCRY1,... | cryptochrome photoreceptor *(CRY) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Lfl_g07997 | HY4, ATCRY1,... | cryptochrome photoreceptor *(CRY) & original description: none | 0.01 | OrthoFinder output from all 47 species | |
| MA_10428291g0010 | HY4, ATCRY1,... | cryptochrome photoreceptor (CRY) | 0.01 | OrthoFinder output from all 47 species | |
| Msp_g01209 | HY4, ATCRY1,... | cryptochrome photoreceptor *(CRY) & original description: none | 0.01 | OrthoFinder output from all 47 species | |
| Msp_g11406 | HY4, ATCRY1,... | cryptochrome photoreceptor *(CRY) & original description: none | 0.01 | OrthoFinder output from all 47 species | |
| Pnu_g02063 | HY4, ATCRY1,... | cryptochrome photoreceptor *(CRY) & original description: none | 0.01 | OrthoFinder output from all 47 species | |
| Pnu_g20088 | HY4, ATCRY1,... | cryptochrome photoreceptor *(CRY) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ppi_g14115 | HY4, ATCRY1,... | cryptochrome photoreceptor *(CRY) & original description: none | 0.01 | OrthoFinder output from all 47 species | |
| Smo92414 | ATCRY2, CRY2,... | External stimuli response.light.UV-A/blue... | 0.02 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0004497 | monooxygenase activity | IEP | HCCA |
| MF | GO:0010277 | chlorophyllide a oxygenase [overall] activity | IEP | HCCA |
| MF | GO:0016491 | oxidoreductase activity | IEP | HCCA |
| MF | GO:0016701 | oxidoreductase activity, acting on single donors with incorporation of molecular oxygen | IEP | HCCA |
| MF | GO:0016702 | oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen | IEP | HCCA |
| MF | GO:0016703 | oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of one atom of oxygen (internal monooxygenases or internal mixed function oxidases) | IEP | HCCA |
| MF | GO:0051213 | dioxygenase activity | IEP | HCCA |
| BP | GO:0055114 | obsolete oxidation-reduction process | IEP | HCCA |
| No external refs found! |