LOC_Os02g19860 (Os02g0301500)


Aliases : Os02g0301500

Description : 27.1 RNA.processing ATP-dependent RNA helicase, putative


Gene families : OG_01_0000259 (Gene family) Phylogenetic Tree(s): OG0000259_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): LOC_Os02g19860
Cluster HCCA cluster: Cluster_173

Target Alias Description ECC score Gene Family Method Actions
AT1G32490 ESP3, EMB2733 RNA helicase family protein 0.03 Gene family
AT2G35340 MEE29 helicase domain-containing protein 0.06 Gene family
Cpa|evm.model.tig00000984.27 No alias 27.1.2 RNA.processing.RNA helicase Encodes a homolog of... 0.02 Gene family
GSVIVT01007911001 No alias 27.1.2 RNA.processing.RNA helicase Encodes a homolog of... 0.03 Gene family
GSVIVT01029863001 No alias 27.1 RNA.processing ATP-dependent RNA helicase, putative 0.04 Gene family
Smo82212 PACid_15409607 27.1.2 RNA.processing.RNA helicase Encodes a homolog of... 0.02 Gene family
Solyc03g115390.3.1 Solyc03g115390.3 27.1.2 RNA.processing.RNA helicase Encodes a homolog of... 0.03 Gene family
Solyc09g008120.3.1 Solyc09g008120.3 27.1.2 RNA.processing.RNA helicase RNA helicase family protein 0.03 Gene family
Solyc10g076910.2.1 Solyc10g076910.2 27.1.2 RNA.processing.RNA helicase embryo defective 3011... 0.04 Gene family
Zm00001d015893 GRMZM2G029258 27.1 RNA.processing ATP-dependent RNA helicase, putative 0.05 Gene family

Type GO Term Name Evidence Source
MF GO:0004386 helicase activity IEA InterProScan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR003029 S1_domain 282 351
IPR011709 DUF1605 1125 1200
IPR011545 DEAD/DEAH_box_helicase_dom 593 743
IPR001650 Helicase_C 785 917
IPR007502 Helicase-assoc_dom 979 1067
No external refs found!