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Aliases : MAC3B
Description : Pre-mRNA-processing factor 19 OS=Oryza sativa subsp. japonica
Gene families : OG0002806 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002806_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AT1G04510 | MAC3A | MOS4-associated complex 3A | 0.02 | OrthoFinder output from all 47 species | |
| AT2G33340 | MAC3B | MOS4-associated complex 3B | 0.02 | OrthoFinder output from all 47 species | |
| Adi_g088167 | MAC3B | E3 ubiquitin protein ligase *(PUB60) & original description: none | 0.01 | OrthoFinder output from all 47 species | |
| Aev_g05281 | MAC3B | E3 ubiquitin protein ligase *(PUB60) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ala_g01919 | MAC3B | E3 ubiquitin protein ligase *(PUB60) & original description: none | 0.01 | OrthoFinder output from all 47 species | |
| Cba_g05020 | MAC3B | E3 ubiquitin protein ligase *(PUB60) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ceric.06G040200.1 | MAC3A, Ceric.06G040200 | E3 ubiquitin protein ligase *(PUB60) & original... | 0.03 | OrthoFinder output from all 47 species | |
| Cre02.g073650 | MAC3B | RNA processing.RNA splicing.spliceosome-associated... | 0.02 | OrthoFinder output from all 47 species | |
| Dcu_g02996 | MAC3A | E3 ubiquitin protein ligase *(PUB60) & original description: none | 0.01 | OrthoFinder output from all 47 species | |
| Len_g09847 | MAC3B | E3 ubiquitin protein ligase *(PUB60) & original description: none | 0.01 | OrthoFinder output from all 47 species | |
| MA_20260g0010 | MAC3A | component MAC3 of non-snRNP MOS4-associated complex | 0.02 | OrthoFinder output from all 47 species | |
| Mp4g08560.1 | MAC3A | component MAC3 of non-snRNP MOS4-associated complex | 0.01 | OrthoFinder output from all 47 species | |
| Nbi_g11129 | MAC3B | E3 ubiquitin protein ligase *(PUB60) & original description: none | 0.01 | OrthoFinder output from all 47 species | |
| Pir_g02531 | MAC3A | E3 ubiquitin protein ligase *(PUB60) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Pir_g17949 | MAC3B | E3 ubiquitin protein ligase *(PUB60) & original description: none | 0.01 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0030.g010488 | MAC3A | E3 ubiquitin protein ligase *(PUB60) & original... | 0.01 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0429.g027376 | MAC3B | E3 ubiquitin protein ligase *(PUB60) & original... | 0.02 | OrthoFinder output from all 47 species | |
| Solyc09g090660.3.1 | MAC3A, Solyc09g090660 | component MAC3 of non-snRNP MOS4-associated complex | 0.03 | OrthoFinder output from all 47 species | |
| Spa_g07858 | MAC3A | E3 ubiquitin protein ligase *(PUB60) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Zm00001e004625_P001 | MAC3B, Zm00001e004625 | component MAC3 of non-snRNP MOS4-associated complex | 0.01 | OrthoFinder output from all 47 species | |
| Zm00001e012723_P001 | MAC3B, Zm00001e012723 | component MAC3 of non-snRNP MOS4-associated complex | 0.02 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0005515 | protein binding | IEA | Interproscan |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003676 | nucleic acid binding | IEP | HCCA |
| MF | GO:0003690 | double-stranded DNA binding | IEP | HCCA |
| BP | GO:0006353 | DNA-templated transcription termination | IEP | HCCA |
| BP | GO:0006553 | lysine metabolic process | IEP | HCCA |
| MF | GO:0008289 | lipid binding | IEP | HCCA |
| BP | GO:0008652 | amino acid biosynthetic process | IEP | HCCA |
| MF | GO:0008839 | 4-hydroxy-tetrahydrodipicolinate reductase | IEP | HCCA |
| BP | GO:0009066 | aspartate family amino acid metabolic process | IEP | HCCA |
| BP | GO:0009067 | aspartate family amino acid biosynthetic process | IEP | HCCA |
| BP | GO:0009085 | lysine biosynthetic process | IEP | HCCA |
| BP | GO:0009089 | lysine biosynthetic process via diaminopimelate | IEP | HCCA |
| BP | GO:0016053 | organic acid biosynthetic process | IEP | HCCA |
| MF | GO:0016627 | oxidoreductase activity, acting on the CH-CH group of donors | IEP | HCCA |
| MF | GO:0016628 | oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor | IEP | HCCA |
| MF | GO:0019842 | vitamin binding | IEP | HCCA |
| MF | GO:0030170 | pyridoxal phosphate binding | IEP | HCCA |
| BP | GO:0043648 | dicarboxylic acid metabolic process | IEP | HCCA |
| BP | GO:0046394 | carboxylic acid biosynthetic process | IEP | HCCA |
| BP | GO:0046451 | diaminopimelate metabolic process | IEP | HCCA |
| MF | GO:0070279 | vitamin B6 binding | IEP | HCCA |
| MF | GO:0097159 | organic cyclic compound binding | IEP | HCCA |
| MF | GO:1901363 | heterocyclic compound binding | IEP | HCCA |
| BP | GO:1901605 | alpha-amino acid metabolic process | IEP | HCCA |
| BP | GO:1901607 | alpha-amino acid biosynthetic process | IEP | HCCA |
| No external refs found! |