LOC_Os02g18810 (Os02g0290000)


Aliases : Os02g0290000

Description : 35.1.5 not assigned.no ontology.pentatricopeptide (PPR) repeat-containing protein Tetratricopeptide repeat (TPR)-like superfamily protein


Gene families : OG_01_0000001 (Gene family) Phylogenetic Tree(s): OG0000001_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): LOC_Os02g18810
Cluster HCCA cluster: Cluster_174

Target Alias Description ECC score Gene Family Method Actions
AT3G08820 No alias Pentatricopeptide repeat (PPR) superfamily protein 0.02 Gene family
AT3G11460 No alias Pentatricopeptide repeat (PPR) superfamily protein 0.02 Gene family
AT3G53360 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.02 Gene family
AT4G39952 No alias Pentatricopeptide repeat (PPR) superfamily protein 0.02 Gene family
AT5G27110 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.02 Gene family
GSVIVT01017880001 No alias No description available 0.02 Gene family
GSVIVT01020758001 No alias 35.1.5 not assigned.no ontology.pentatricopeptide (PPR)... 0.02 Gene family
GSVIVT01021756001 No alias 35.1.5 not assigned.no ontology.pentatricopeptide (PPR)... 0.02 Gene family
GSVIVT01024912001 No alias No description available 0.03 Gene family
GSVIVT01027504001 No alias 35.1.5 not assigned.no ontology.pentatricopeptide (PPR)... 0.02 Gene family
GSVIVT01029382001 No alias 35.1.27 not assigned.no ontology.tetratricopeptide... 0.03 Gene family
GSVIVT01032994001 No alias No description available 0.03 Gene family
GSVIVT01036511001 No alias No description available 0.02 Gene family
LOC_Os01g01115 Os01g0101150 No description available 0.02 Gene family
MA_6527g0010 No alias No description available 0.02 Gene family
Solyc01g100800.2.1 Solyc01g100800.2 35.1.5 not assigned.no ontology.pentatricopeptide (PPR)... 0.03 Gene family
Solyc04g064750.2.1 Solyc04g064750.2 No description available 0.02 Gene family
Solyc05g012630.1.1 Solyc05g012630.1 35.1.5 not assigned.no ontology.pentatricopeptide (PPR)... 0.02 Gene family
Solyc08g023640.1.1 Solyc08g023640.1 35.1.5 not assigned.no ontology.pentatricopeptide (PPR)... 0.03 Gene family
Solyc09g010070.1.1 Solyc09g010070.1 35.1.5 not assigned.no ontology.pentatricopeptide (PPR)... 0.02 Gene family

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 265 305
IPR002885 Pentatricopeptide_repeat 701 749
IPR002885 Pentatricopeptide_repeat 368 415
IPR002885 Pentatricopeptide_repeat 134 156
IPR002885 Pentatricopeptide_repeat 576 602
IPR002885 Pentatricopeptide_repeat 164 191
IPR002885 Pentatricopeptide_repeat 545 570
IPR002885 Pentatricopeptide_repeat 605 634
No external refs found!