Cpa|evm.model.tig00021357.51

Description : ATP-dependent DNA helicase At3g02060, chloroplastic OS=Arabidopsis thaliana

Gene families : OG0004721 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004721_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Cpa\|evm.model.tig00021357.51

Target	Alias	Description	ECC score	Gene Family Method
Ala_g17279	No alias	not classified & original description: none	0.01	OrthoFinder output from all 47 species
Aop_g22379	No alias	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Azfi_s0257.g060601	No alias	not classified & original description: CDS=200-3178	0.02	OrthoFinder output from all 47 species
Ceric.13G022800.1	Ceric.13G022800	not classified & original description: pacid=50636376...	0.02	OrthoFinder output from all 47 species
Len_g28141	No alias	not classified & original description: none	0.01	OrthoFinder output from all 47 species
Lfl_g05693	No alias	not classified & original description: none	0.01	OrthoFinder output from all 47 species
Msp_g14110	No alias	not classified & original description: none	0.01	OrthoFinder output from all 47 species
Tin_g27619	No alias	not classified & original description: none	0.01	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
MF	GO:0005524	ATP binding	IEA	Interproscan
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0030554	adenyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032559	adenyl ribonucleotide binding	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR003711	CarD-like/TRCF_RID	18	106
IPR011545	DEAD/DEAH_box_helicase_dom	157	280

External Links

No external refs found!