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  5. Cpa|evm.model.tig00021350.35

Cpa|evm.model.tig00021350.35 (APC6)


Aliases : APC6

Description : Cell cycle.mitosis and meiosis.metaphase to anaphase transition.Anaphase-Promoting Complex/Cyclosome (APC/C)-dependent ubiquitination.APC/C E3 ubiquitin ligase complex.arc lamp subcomplex.APC6 component


Gene families : OG0005600 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0005600_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cpa|evm.model.tig00021350.35
Cluster HCCA: Cluster_8

Target Alias Description ECC score Gene Family Method Actions
Ceric.29G072200.1 APC6, Ceric.29G072200 component *(APC6) of (APC/C)-dependent ubiquitination... 0.01 OrthoFinder output from all 47 species
Solyc12g014320.2.1 APC6, Solyc12g014320 component APC6 of (APC/C)-dependent ubiquitination arc... 0.02 OrthoFinder output from all 47 species
Zm00001e000977_P002 APC6, Zm00001e000977 component APC6 of (APC/C)-dependent ubiquitination arc... 0.03 OrthoFinder output from all 47 species
Zm00001e038627_P004 APC6, Zm00001e038627 component APC6 of (APC/C)-dependent ubiquitination arc... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
CC GO:0005667 transcription regulator complex IEP HCCA
CC GO:0005669 transcription factor TFIID complex IEP HCCA
BP GO:0006352 DNA-templated transcription initiation IEP HCCA
BP GO:0006367 transcription initiation at RNA polymerase II promoter IEP HCCA
BP GO:0032774 RNA biosynthetic process IEP HCCA
CC GO:0090575 RNA polymerase II transcription regulator complex IEP HCCA
CC GO:0140513 nuclear protein-containing complex IEP HCCA
InterPro domains Description Start Stop
IPR019734 TPR_repeat 116 146
No external refs found!