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  5. Cpa|evm.model.tig00021348.57

Cpa|evm.model.tig00021348.57 (RPN5B)


Aliases : RPN5B

Description : Protein degradation.26S proteasome.regulatory particle.non-ATPase subunits.RPN5 regulatory component


Gene families : OG0003644 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003644_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cpa|evm.model.tig00021348.57
Cluster HCCA: Cluster_85

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00099p00018620 RPN5B,... Protein degradation.26S proteasome.regulatory... 0.03 OrthoFinder output from all 47 species
AT5G09900 EMB2107, MSA, RPN5A 26S proteasome regulatory subunit, putative (RPN5) 0.04 OrthoFinder output from all 47 species
Adi_g082899 RPN5B regulatory component *(RPN5) of 26S proteasome &... 0.01 OrthoFinder output from all 47 species
Aop_g13431 RPN5B regulatory component *(RPN5) of 26S proteasome &... 0.03 OrthoFinder output from all 47 species
Azfi_s0081.g038574 RPN5B regulatory component *(RPN5) of 26S proteasome &... 0.03 OrthoFinder output from all 47 species
Ceric.1Z048700.1 RPN5B, Ceric.1Z048700 regulatory component *(RPN5) of 26S proteasome &... 0.05 OrthoFinder output from all 47 species
Cre14.g632775 RPN5B Protein degradation.26S proteasome.regulatory... 0.19 OrthoFinder output from all 47 species
Ehy_g03758 RPN5B regulatory component *(RPN5) of 26S proteasome &... 0.02 OrthoFinder output from all 47 species
GSVIVT01022276001 RPN5B Protein degradation.26S proteasome.regulatory... 0.03 OrthoFinder output from all 47 species
Gb_00178 EMB2107, MSA, RPN5A regulatory component RPN5 of 26S proteasome 0.04 OrthoFinder output from all 47 species
Gb_00179 RPN5B regulatory component RPN5 of 26S proteasome 0.02 OrthoFinder output from all 47 species
LOC_Os03g63430.1 RPN5B, LOC_Os03g63430 regulatory component RPN5 of 26S proteasome 0.06 OrthoFinder output from all 47 species
MA_10427293g0010 RPN5B regulatory component RPN5 of 26S proteasome 0.05 OrthoFinder output from all 47 species
MA_10435598g0010 EMB2107, MSA, RPN5A regulatory component RPN5 of 26S proteasome 0.05 OrthoFinder output from all 47 species
Mp6g06620.1 RPN5B regulatory component RPN5 of 26S proteasome 0.12 OrthoFinder output from all 47 species
Msp_g01635 RPN5B regulatory component *(RPN5) of 26S proteasome &... 0.03 OrthoFinder output from all 47 species
Nbi_g08616 RPN5B regulatory component *(RPN5) of 26S proteasome &... 0.03 OrthoFinder output from all 47 species
Ore_g17093 RPN5B regulatory component *(RPN5) of 26S proteasome &... 0.02 OrthoFinder output from all 47 species
Pir_g00574 RPN5B regulatory component *(RPN5) of 26S proteasome &... 0.03 OrthoFinder output from all 47 species
Pp3c10_9730V3.1 RPN5B, Pp3c10_9730 26S proteasome regulatory subunit, putative (RPN5) 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0083.g018154 RPN5B regulatory component *(RPN5) of 26S proteasome &... 0.01 OrthoFinder output from all 47 species
Sam_g11859 No alias regulatory component *(RPN5) of 26S proteasome &... 0.02 OrthoFinder output from all 47 species
Sam_g24935 No alias regulatory component *(RPN5) of 26S proteasome &... 0.02 OrthoFinder output from all 47 species
Solyc04g012040.3.1 RPN5B, Solyc04g012040 regulatory component RPN5 of 26S proteasome 0.04 OrthoFinder output from all 47 species
Solyc04g051370.4.1 RPN5B, Solyc04g051370 regulatory component RPN5 of 26S proteasome 0.07 OrthoFinder output from all 47 species
Spa_g09767 RPN5B regulatory component *(RPN5) of 26S proteasome &... 0.03 OrthoFinder output from all 47 species
Tin_g01849 RPN5B regulatory component *(RPN5) of 26S proteasome &... 0.01 OrthoFinder output from all 47 species
Zm00001e011647_P002 RPN5B, Zm00001e011647 regulatory component RPN5 of 26S proteasome 0.07 OrthoFinder output from all 47 species
Zm00001e016264_P001 RPN5B, Zm00001e016264 regulatory component RPN5 of 26S proteasome 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
CC GO:0000502 proteasome complex IEP HCCA
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0004175 endopeptidase activity IEP HCCA
MF GO:0004298 threonine-type endopeptidase activity IEP HCCA
MF GO:0004807 triose-phosphate isomerase activity IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
CC GO:0005575 cellular_component IEP HCCA
CC GO:0005839 proteasome core complex IEP HCCA
BP GO:0006508 proteolysis IEP HCCA
BP GO:0006807 nitrogen compound metabolic process IEP HCCA
BP GO:0006888 endoplasmic reticulum to Golgi vesicle-mediated transport IEP HCCA
BP GO:0008150 biological_process IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
MF GO:0008233 peptidase activity IEP HCCA
BP GO:0009894 regulation of catabolic process IEP HCCA
BP GO:0016192 vesicle-mediated transport IEP HCCA
MF GO:0016787 hydrolase activity IEP HCCA
MF GO:0016860 intramolecular oxidoreductase activity IEP HCCA
MF GO:0016861 intramolecular oxidoreductase activity, interconverting aldoses and ketoses IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
BP GO:0019538 protein metabolic process IEP HCCA
MF GO:0030234 enzyme regulator activity IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
CC GO:0032991 protein-containing complex IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
BP GO:0042176 regulation of protein catabolic process IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043168 anion binding IEP HCCA
BP GO:0043170 macromolecule metabolic process IEP HCCA
BP GO:0044238 primary metabolic process IEP HCCA
BP GO:0048193 Golgi vesicle transport IEP HCCA
BP GO:0051246 regulation of protein metabolic process IEP HCCA
BP GO:0051603 proteolysis involved in protein catabolic process IEP HCCA
MF GO:0070003 threonine-type peptidase activity IEP HCCA
BP GO:0071704 organic substance metabolic process IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
MF GO:0098772 molecular function regulator activity IEP HCCA
MF GO:0140096 catalytic activity, acting on a protein IEP HCCA
CC GO:0140535 intracellular protein-containing complex IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
BP GO:1901564 organonitrogen compound metabolic process IEP HCCA
CC GO:1902494 catalytic complex IEP HCCA
CC GO:1905368 peptidase complex IEP HCCA
CC GO:1905369 endopeptidase complex IEP HCCA

No InterPro domains available for this sequence

No external refs found!