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  5. Cpa|evm.model.tig00021319.55

Cpa|evm.model.tig00021319.55


Description : Flagellar WD repeat-containing protein Pf20 OS=Chlamydomonas reinhardtii


Gene families : OG0009268 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0009268_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cpa|evm.model.tig00021319.55

Target Alias Description ECC score Gene Family Method Actions
Ceric.37G040900.1 Ceric.37G040900 not classified & original description: pacid=50615898... 0.06 OrthoFinder output from all 47 species
Cre04.g227900 SPA3 Flagellar WD repeat-containing protein Pf20... 0.11 OrthoFinder output from all 47 species
Mp8g11420.1 No alias Flagellar WD repeat-containing protein Pf20... 0.06 OrthoFinder output from all 47 species
Pp3c9_22280V3.1 Pp3c9_22280 Transducin/WD40 repeat-like superfamily protein 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0047.g013497 No alias not classified & original description: CDS=1-1542 0.01 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003678 DNA helicase activity IEP HCCA
MF GO:0004386 helicase activity IEP HCCA
MF GO:0008094 ATP-dependent activity, acting on DNA IEP HCCA
InterPro domains Description Start Stop
IPR001680 WD40_repeat 453 489
IPR001680 WD40_repeat 284 320
IPR001680 WD40_repeat 327 363
IPR001680 WD40_repeat 369 405
IPR001680 WD40_repeat 537 573
IPR001680 WD40_repeat 410 447
No external refs found!