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  5. Cpa|evm.model.tig00021281.14

Cpa|evm.model.tig00021281.14


Description : Ubiquitin carboxyl-terminal hydrolase 13 OS=Arabidopsis thaliana


Gene families : OG0005085 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0005085_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cpa|evm.model.tig00021281.14

Target Alias Description ECC score Gene Family Method Actions
Aev_g33294 UBP12 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g06394 UBP12 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g57720 UBP12 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g29880 UBP12 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene23682.t2 UBP12, Aspi01Gene23682 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene57571.t2 Aspi01Gene57571 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Azfi_s0006.g010362 UBP12 not classified & original description: CDS=350-7828 0.03 OrthoFinder output from all 47 species
Ceric.15G071100.1 UBP12, Ceric.15G071100 not classified & original description: pacid=50640759... 0.04 OrthoFinder output from all 47 species
Dac_g27627 UBP12 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g23057 UBP12 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g12126 UBP12 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Gb_35991 UBP12 Ubiquitin carboxyl-terminal hydrolase 12 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
Len_g13952 UBP13 not classified & original description: none 0.02 OrthoFinder output from all 47 species
MA_10436921g0010 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
MA_17762g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Msp_g42753 UBP12 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g26173 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g43540 UBP12 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Smo447032 UBP12 Protein degradation.peptidase families.cysteine-type... 0.02 OrthoFinder output from all 47 species
Spa_g09112 UBP12 not classified & original description: none 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0009187 cyclic nucleotide metabolic process IEP HCCA
BP GO:0009190 cyclic nucleotide biosynthetic process IEP HCCA
BP GO:0016043 cellular component organization IEP HCCA
MF GO:0016849 phosphorus-oxygen lyase activity IEP HCCA
BP GO:0022607 cellular component assembly IEP HCCA
BP GO:0043248 proteasome assembly IEP HCCA
BP GO:0043933 protein-containing complex organization IEP HCCA
BP GO:0065003 protein-containing complex assembly IEP HCCA
InterPro domains Description Start Stop
IPR001394 Peptidase_C19_UCH 1414 1736
IPR000626 Ubiquitin-like_dom 871 935
No external refs found!