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  5. Cpa|evm.model.tig00021127.129

Cpa|evm.model.tig00021127.129 (ARFA1E, ATARFA1E)


Aliases : ARFA1E, ATARFA1E

Description : Vesicle trafficking.Coat protein I (COPI) coatomer machinery.coat protein recruiting.ARF-GTPase


Gene families : OG0000301 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000301_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cpa|evm.model.tig00021127.129

Target Alias Description ECC score Gene Family Method Actions
AT2G47170 ARF1A1C Ras-related small GTP-binding family protein 0.04 OrthoFinder output from all 47 species
AT3G03120 ATARFB1C, ARFB1C ADP-ribosylation factor B1C 0.02 OrthoFinder output from all 47 species
Adi_g009716 ATARFA1F, ARFA1F ARF-GTPase *(ARF1) & original description: none 0.04 OrthoFinder output from all 47 species
Adi_g024167 ATARFA1B, ARFA1B ARF-GTPase *(ARF1) & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g098666 ATARFA1B, ARFA1B ARF-GTPase *(ARF1) & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g098748 ATARFA1B, ARFA1B ARF-GTPase *(ARF1) & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g110620 ATARFA1F, ARFA1F not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g112037 ATARFA1B, ARFA1B ARF-GTPase *(ARF1) & original description: none 0.01 OrthoFinder output from all 47 species
Ala_g30565 ATARFA1F, ARFA1F ARF-GTPase *(ARF1) & original description: none 0.02 OrthoFinder output from all 47 species
Als_g12669 ATARFA1B, ARFA1B ARF-GTPase *(ARF1) & original description: none 0.02 OrthoFinder output from all 47 species
Als_g20796 ATARFA1F, ARFA1F ARF-GTPase *(ARF1) & original description: none 0.02 OrthoFinder output from all 47 species
Als_g34157 ATARFA1F, ARFA1F ARF-GTPase *(ARF1) & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g06300 ATARFA1F, ARFA1F ARF-GTPase *(ARF1) & original description: none 0.01 OrthoFinder output from all 47 species
Aob_g14443 ATARFA1F, ARFA1F ARF-GTPase *(ARF1) & original description: none 0.01 OrthoFinder output from all 47 species
Cba_g06881 ATARFA1B, ARFA1B ARF-GTPase *(ARF1) & original description: none 0.01 OrthoFinder output from all 47 species
Cba_g48801 ATARFA1F, ARFA1F not classified & original description: none 0.01 OrthoFinder output from all 47 species
Cba_g69136 ATARFA1F, ARFA1F ARF-GTPase *(ARF1) & original description: none 0.01 OrthoFinder output from all 47 species
Ceric.09G076800.1 ATARFA1B,... ARF-GTPase *(ARF1) & original description:... 0.04 OrthoFinder output from all 47 species
Ceric.12G047200.1 ATARFA1B,... ARF-GTPase *(ARF1) & original description:... 0.05 OrthoFinder output from all 47 species
Ceric.24G027900.1 ATARFA1B,... not classified & original description: pacid=50629605... 0.01 OrthoFinder output from all 47 species
Ceric.25G015600.1 ATARFA1B,... ARF-GTPase *(ARF1) & original description:... 0.02 OrthoFinder output from all 47 species
Cre12.g486250 ARFA1E, ATARFA1E Vesicle trafficking.Coat protein I (COPI) coatomer... 0.03 OrthoFinder output from all 47 species
Cre12.g487850 ATARFB1B, ARFB1B Vesicle trafficking.Coat protein I (COPI) coatomer... 0.02 OrthoFinder output from all 47 species
Dcu_g40902 ATARFA1F, ARFA1F not classified & original description: none 0.01 OrthoFinder output from all 47 species
Dde_g09805 ATARFA1F, ARFA1F ARF-GTPase *(ARF1) & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g07364 ARF1A1C ARF-GTPase *(ARF1) & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01013765001 ARFA1E, ATARFA1E Vesicle trafficking.Coat protein I (COPI) coatomer... 0.03 OrthoFinder output from all 47 species
GSVIVT01017654001 ATARFA1F, ARFA1F Vesicle trafficking.Coat protein I (COPI) coatomer... 0.04 OrthoFinder output from all 47 species
GSVIVT01028179001 ARFA1E, ATARFA1E Vesicle trafficking.Coat protein I (COPI) coatomer... 0.03 OrthoFinder output from all 47 species
LOC_Os03g59740.1 ATARFA1B,... ARF-GTPase 0.01 OrthoFinder output from all 47 species
LOC_Os05g41060.1 ATARFA1F,... ARF-GTPase 0.02 OrthoFinder output from all 47 species
LOC_Os07g12170.1 ARF1A1C, LOC_Os07g12170 ARF-GTPase 0.02 OrthoFinder output from all 47 species
LOC_Os07g12200.1 ARF1A1C, LOC_Os07g12200 ARF-GTPase 0.02 OrthoFinder output from all 47 species
Len_g03591 ATARFA1F, ARFA1F ARF-GTPase *(ARF1) & original description: none 0.02 OrthoFinder output from all 47 species
Len_g04178 ATARFB1B, ARFB1B ARF-GTPase *(ARFA) & original description: none 0.02 OrthoFinder output from all 47 species
Len_g05681 ATARFA1B, ARFA1B ARF-GTPase *(ARF1) & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g04441 ATARFA1F, ARFA1F ARF-GTPase *(ARF1) & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g23069 ATARFA1F, ARFA1F ARF-GTPase *(ARF1) & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g31478 ATARFA1F, ARFA1F ARF-GTPase *(ARF1) & original description: none 0.02 OrthoFinder output from all 47 species
MA_24477g0010 ATARFA1F, ARFA1F ARF-GTPase 0.03 OrthoFinder output from all 47 species
MA_7293641g0010 ATARFB1B, ARFB1B ADP-ribosylation factor 1 OS=Oryza sativa subsp.... 0.02 OrthoFinder output from all 47 species
MA_9401071g0010 ATARFA1F, ARFA1F ARF-GTPase 0.01 OrthoFinder output from all 47 species
Mp8g07320.1 ATARFB1C, ARFB1C ARF-GTPase 0.03 OrthoFinder output from all 47 species
Nbi_g01882 ATARFB1B, ARFB1B ARF-GTPase *(ARFA) & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g26501 ATARFB1B, ARFB1B ARF-GTPase *(ARFA) & original description: none 0.01 OrthoFinder output from all 47 species
Pnu_g19970 ATARFA1F, ARFA1F ARF-GTPase *(ARF1) & original description: none 0.01 OrthoFinder output from all 47 species
Pp3c10_20740V3.1 ARFA1E,... ADP-ribosylation factor A1E 0.02 OrthoFinder output from all 47 species
Pp3c12_14940V3.1 ARFA1E,... ADP-ribosylation factor A1E 0.03 OrthoFinder output from all 47 species
Ppi_g00532 ATARFB1B, ARFB1B ARF-GTPase *(ARFA) & original description: none 0.01 OrthoFinder output from all 47 species
Ppi_g63645 ATARFA1B, ARFA1B ARF-GTPase *(ARF1) & original description: none 0.01 OrthoFinder output from all 47 species
Solyc01g008000.3.1 ATARFA1B,... ARF-GTPase 0.02 OrthoFinder output from all 47 species
Solyc01g100860.3.1 ARFA1E,... ARF-GTPase 0.07 OrthoFinder output from all 47 species
Solyc01g100870.3.1 ARF1A1C, Solyc01g100870 ARF-GTPase 0.06 OrthoFinder output from all 47 species
Solyc03g096910.3.1 ATARFB1C,... ARF-GTPase 0.03 OrthoFinder output from all 47 species
Spa_g49716 ATARFA1B, ARFA1B ARF-GTPase *(ARF1) & original description: none 0.01 OrthoFinder output from all 47 species
Spa_g49717 ATARFA1B, ARFA1B ARF-GTPase *(ARF1) & original description: none 0.01 OrthoFinder output from all 47 species
Spa_g51173 ATARFA1F, ARFA1F ARF-GTPase *(ARF1) & original description: none 0.01 OrthoFinder output from all 47 species
Spa_g51715 ATARFA1B, ARFA1B ARF-GTPase *(ARF1) & original description: none 0.01 OrthoFinder output from all 47 species
Tin_g02993 ATARFA1F, ARFA1F ARF-GTPase *(ARF1) & original description: none 0.01 OrthoFinder output from all 47 species
Tin_g03151 ATARFB1B, ARFB1B ARF-GTPase *(ARFA) & original description: none 0.01 OrthoFinder output from all 47 species
Tin_g05371 ATARFA1F, ARFA1F ARF-GTPase *(ARF1) & original description: none 0.01 OrthoFinder output from all 47 species
Tin_g08915 ATARFA1F, ARFA1F ARF-GTPase *(ARF1) & original description: none 0.01 OrthoFinder output from all 47 species
Zm00001e011790_P001 ATARFA1B,... ARF-GTPase 0.06 OrthoFinder output from all 47 species
Zm00001e019488_P002 ARFA1E,... ARF-GTPase 0.04 OrthoFinder output from all 47 species
Zm00001e033127_P003 ARF1A1C, Zm00001e033127 ARF-GTPase 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005525 GTP binding IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003924 GTPase activity IEP HCCA
BP GO:0016192 vesicle-mediated transport IEP HCCA
MF GO:0016462 pyrophosphatase activity IEP HCCA
MF GO:0016817 hydrolase activity, acting on acid anhydrides IEP HCCA
MF GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides IEP HCCA
MF GO:0017111 ribonucleoside triphosphate phosphatase activity IEP HCCA
InterPro domains Description Start Stop
IPR006689 Small_GTPase_ARF/SAR 7 176
No external refs found!