LOC_Os02g15580 (Os02g0255000)


Aliases : Os02g0255000

Description : 34.22 transport.cyclic nucleotide or calcium regulated channels member of Cyclic nucleotide gated channel family cyclic nucleotide gated channel 1 (CNGC1)


Gene families : OG_01_0000081 (Gene family) Phylogenetic Tree(s): OG0000081_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): LOC_Os02g15580
Cluster HCCA cluster: Cluster_26

Target Alias Description ECC score Gene Family Method Actions
AT1G15990 CNGC7, ATCNGC7 cyclic nucleotide gated channel 7 0.02 Gene family
AT4G01010 ATCNGC13, CNGC13 cyclic nucleotide-gated channel 13 0.02 Gene family
GSVIVT01028711001 No alias 34.22 transport.cyclic nucleotide or calcium regulated... 0.02 Gene family
GSVIVT01029407001 No alias 34.22 transport.cyclic nucleotide or calcium regulated... 0.03 Gene family
Smo113786 PACid_15418666 No description available 0.02 Gene family
Solyc03g007260.3.1 Solyc03g007260.3 34.22 transport.cyclic nucleotide or calcium regulated... 0.02 Gene family
Solyc07g006510.3.1 Solyc07g006510.3 34.22 transport.cyclic nucleotide or calcium regulated... 0.03 Gene family
Solyc08g069140.3.1 Solyc08g069140.3 34.22 transport.cyclic nucleotide or calcium regulated... 0.03 Gene family
Zm00001d002099 GRMZM2G023037 34.22 transport.cyclic nucleotide or calcium regulated... 0.04 Gene family
Zm00001d018233 GRMZM2G141642,... 34.22 transport.cyclic nucleotide or calcium regulated... 0.03 Gene family
Zm00001d018339 GRMZM2G005791 34.22 transport.cyclic nucleotide or calcium regulated... 0.03 Gene family
Zm00001d021388 GRMZM2G135651 34.22 transport.cyclic nucleotide or calcium regulated... 0.02 Gene family
Zm00001d037035 GRMZM2G129375,... 34.22 transport.cyclic nucleotide or calcium regulated... 0.03 Gene family

Type GO Term Name Evidence Source
MF GO:0005216 ion channel activity IEA InterProScan
BP GO:0006811 ion transport IEA InterProScan
CC GO:0016020 membrane IEA InterProScan
BP GO:0055085 transmembrane transport IEA InterProScan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR005821 Ion_trans_dom 11 194
IPR000595 cNMP-bd_dom 290 379
No external refs found!