LOC_Os02g15340 (Os02g0252200)


Aliases : Os02g0252200

Description : 33.99 development.unspecified NAC-domain protein. Involved in root cap development. Involved in a regulatory feedback loop with FEZ. FEZ activates SMB in hte root cap daughter cells soon after division, and SMB in turn represses FEZ expression in these cells, thereby preventing further stem cell divisions. SOMBRERO (SMB)


Gene families : OG_01_0000027 (Gene family) Phylogenetic Tree(s): OG0000027_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): LOC_Os02g15340
Cluster HCCA cluster: Cluster_200

Target Alias Description ECC score Gene Family Method Actions
AT1G32770 ANAC012, NST3,... NAC domain containing protein 12 0.03 Gene family
AT1G76420 ANAC031, NAC368, CUC3 NAC (No Apical Meristem) domain transcriptional... 0.02 Gene family
AT2G18060 VND1, ANAC037 vascular related NAC-domain protein 1 0.02 Gene family
AT2G27300 ANAC040, NTL8 NTM1-like 8 0.02 Gene family
AT2G46770 NST1, ANAC043, EMB2301 NAC (No Apical Meristem) domain transcriptional... 0.02 Gene family
AT3G18400 anac058, NAC058 NAC domain containing protein 58 0.02 Gene family
AT3G61910 NST2, NAC066, ANAC066 NAC domain protein 66 0.02 Gene family
AT4G10350 ANAC070, BRN2, NAC070 NAC domain containing protein 70 0.02 Gene family
AT5G53950 ATCUC2, ANAC098, CUC2 NAC (No Apical Meristem) domain transcriptional... 0.02 Gene family
GSVIVT01001264001 No alias 33.99 development.unspecified Encodes a NAC-domain... 0.02 Gene family
GSVIVT01008291001 No alias 33.99 development.unspecified NAC domain containing... 0.03 Gene family
GSVIVT01018809001 No alias 33.99 development.unspecified Encodes a NAC-domain... 0.02 Gene family
GSVIVT01019670001 No alias 33.99 development.unspecified NAC transcription factor... 0.02 Gene family
GSVIVT01027431001 No alias 33.99 development.unspecified NAC transcription factor... 0.02 Gene family
LOC_Os02g42970 Os02g0643600 33.99 development.unspecified Encodes a NAC-domain... 0.01 Gene family
LOC_Os03g42630 Os03g0624600 33.99 development.unspecified NAC domain containing... 0.03 Gene family
LOC_Os06g23650 Os06g0344900 33.99 development.unspecified Transcriptional activator... 0.02 Gene family
LOC_Os08g40030 Os08g0511200 33.99 development.unspecified Identified in an enhancer... 0.03 Gene family
LOC_Os09g32260 Os09g0497900 33.99 development.unspecified Arabidopsis NAC domain... 0.02 Gene family
LOC_Os11g03370 Os11g0127600 33.99 development.unspecified Arabidopsis NAC domain... 0.02 Gene family
MA_109677g0010 No alias 33.99 development.unspecified NAC domain containing... 0.02 Gene family
MA_15204g0010 No alias 27.3.27 RNA.regulation of transcription.NAC domain... 0.02 Gene family
MA_381604g0010 No alias 27.3.27 RNA.regulation of transcription.NAC domain... 0.02 Gene family
Solyc02g084345.1.1 Solyc02g084345.1 33.99 development.unspecified Encodes a NAC-domain... 0.03 Gene family
Solyc03g083880.3.1 Solyc03g083880.3 33.99 development.unspecified Encodes a NAC-domain... 0.02 Gene family
Solyc03g115850.3.1 Solyc03g115850.3 33.99 development.unspecified NAC domain containing... 0.02 Gene family
Solyc06g061080.3.1 Solyc06g061080.3 33.99 development.unspecified NAC domain containing... 0.02 Gene family
Solyc06g063430.2.1 Solyc06g063430.2 33.99 development.unspecified NAC domain protein. SMB,... 0.04 Gene family
Solyc06g065410.3.1 Solyc06g065410.3 33.99 development.unspecified Encodes a NAC-domain... 0.02 Gene family
Solyc08g008660.3.1 Solyc08g008660.3 33.99 development.unspecified NAC transcription factor... 0.02 Gene family
Solyc11g018660.2.1 Solyc11g018660.2 33.99 development.unspecified Encodes a NAC-domain... 0.02 Gene family
Solyc12g017400.2.1 Solyc12g017400.2 33.99 development.unspecified NAC-domain protein.... 0.04 Gene family
Zm00001d003583 GRMZM2G099144 33.99 development.unspecified NAC domain protein. SMB,... 0.05 Gene family
Zm00001d016119 GRMZM2G155816 33.99 development.unspecified NAC-domain protein.... 0.07 Gene family
Zm00001d017396 GRMZM2G315140 33.99 development.unspecified Encodes a NAC-domain... 0.01 Gene family
Zm00001d022517 GRMZM2G181605 33.99 development.unspecified NAC domain containing... 0.02 Gene family
Zm00001d025483 GRMZM2G435824 33.99 development.unspecified NAC domain protein. SMB,... 0.05 Gene family
Zm00001d031463 GRMZM2G430522 33.99 development.unspecified Identified in an enhancer... 0.03 Gene family
Zm00001d035266 GRMZM2G393433 33.99 development.unspecified Transcriptional activator... 0.02 Gene family
Zm00001d036050 GRMZM2G091490 33.99 development.unspecified Encodes SND1, a NAC Domain... 0.02 Gene family
Zm00001d037029 GRMZM2G041746 33.99 development.unspecified NAC-domain protein.... 0.08 Gene family
Zm00001d041791 GRMZM2G139700 33.99 development.unspecified Transcriptional activator... 0.03 Gene family
Zm00001d046126 GRMZM2G104074 33.99 development.unspecified NAC-domain protein.... 0.08 Gene family

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA InterProScan
BP GO:0006355 regulation of transcription, DNA-templated IEA InterProScan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR003441 NAC-dom 11 141
No external refs found!