Cpa|evm.model.tig00021038.67 (CLI1, RPK2, TOAD2)

Aliases : CLI1, RPK2, TOAD2

Description : Dynein assembly factor with WDR repeat domains 1 OS=Chlamydomonas reinhardtii

Gene families : OG0012235 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0012235_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Cpa\|evm.model.tig00021038.67

Target	Alias	Description	ECC score	Gene Family Method
Cpa\|evm.model.tig00001038.28	VCS	No description available	0.05	OrthoFinder output from all 47 species
Cpa\|evm.model.tig00020801.82	MCM4	Dynein assembly factor with WDR repeat domains 1...	0.04	OrthoFinder output from all 47 species
Cpa\|evm.model.tig00021070.1	No alias	Dynein assembly factor with WDR repeat domains 1...	0.03	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0004672	protein kinase activity	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
MF	GO:0005524	ATP binding	IEA	Interproscan
BP	GO:0006468	protein phosphorylation	IEA	Interproscan
BP	GO:0006793	phosphorus metabolic process	None	Extended
BP	GO:0006796	phosphate-containing compound metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
MF	GO:0016301	kinase activity	None	Extended
BP	GO:0016310	phosphorylation	None	Extended
MF	GO:0016740	transferase activity	None	Extended
MF	GO:0016772	transferase activity, transferring phosphorus-containing groups	None	Extended
MF	GO:0016773	phosphotransferase activity, alcohol group as acceptor	None	Extended
MF	GO:0017076	purine nucleotide binding	None	Extended
BP	GO:0019538	protein metabolic process	None	Extended
MF	GO:0030554	adenyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032559	adenyl ribonucleotide binding	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
BP	GO:0036211	protein modification process	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
BP	GO:0043412	macromolecule modification	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:0140096	catalytic activity, acting on a protein	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0003777	microtubule motor activity	IEP	HCCA
MF	GO:0003924	GTPase activity	IEP	HCCA
MF	GO:0005515	protein binding	IEP	HCCA
BP	GO:0007017	microtubule-based process	IEP	HCCA
BP	GO:0007018	microtubule-based movement	IEP	HCCA
MF	GO:0008017	microtubule binding	IEP	HCCA
MF	GO:0008092	cytoskeletal protein binding	IEP	HCCA
MF	GO:0015631	tubulin binding	IEP	HCCA
MF	GO:0044877	protein-containing complex binding	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR001680	WD40_repeat	1788	1825
IPR001680	WD40_repeat	1957	1994
IPR001680	WD40_repeat	1668	1700
IPR001680	WD40_repeat	1915	1951
IPR001680	WD40_repeat	2074	2110
IPR001680	WD40_repeat	2116	2151
IPR001680	WD40_repeat	2031	2068
IPR001680	WD40_repeat	1873	1909
IPR001680	WD40_repeat	1831	1867
IPR001680	WD40_repeat	1748	1783
IPR001680	WD40_repeat	1706	1742
IPR000719	Prot_kinase_dom	283	484

External Links

No external refs found!

Cpa|evm.model.tig00021038.67 (CLI1, RPK2, TOAD2)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation